CF832471

Overview
NameCF832471
Unique NameCF832471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832471 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = -2 
Query:  390 SLKIHSWSWSAIYIALDNVGMWNLRFEFWARQYLGQQFYLGVYTASTSLRDEYPIPKNARFCGKAAG 590
            +++++  SW+AI +  DN GMWNLR E W + YLG+Q Y  V + S SLRDEY IP N   CG   G
Sbjct:  479 NIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIVKG 545
The following BLAST results are available for this feature:
BLAST of CF832471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASOL_TOBAC1.357e-1349.25L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01O15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832471 ID=CF832471; Name=CF832471; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAACCCGCATTACACAACATT
CTTCGTAGTTTGATTGCTTTACATTCCCTTACTGAAAGGCTGAGCCAATT
ATCAAATTGATAAATGAAAATCAACATAATTTTAAATAATACTAACAGTA
ATGCTATAACAGCTACCGCTGTAACAACGGAAATACAACCTTCAATAAAA
AAAAATGAAACCTCCAGCTGGGGTCAATTTCAAGTTCCACTTGTACACAC
TCCTCGCATAAATAAGCAAAGCAACATTAAACTAATCGAATATAAAATTA
AAAATCAAAATTCTACTCGAATCCACAAATTGCGTACCCAACGGGGGATC
ATTTTATTAAATAATAATTTAAAGGGGCCTCGTGTGTCTGCCAGCTGCTT
TGCCGCAAAAACGTGCATTCTTTGGGATGGGATATTCATCCCTTAGTGAA
GTTGATGCTGTGTAAACACCCAAGTAAAATTGTTGTCCAAGGTACTGTCG
TGCCCAAAACTCAAACCTCAAGTTCCACATACCTACGTTATCCAGTGCTA
TATAAATCGCAGACCATGACCAAGAGTGAATTTTCAAAGAAGGGTAGTGG
TAATAACAATAGCAATATCAATAAGGTGATCGGAAAGTCATCGGCGGCAG
CCGGAAACGATGGTCAATCAGCCGGGAAACGTGCCGCGGAGCT
back to top