CF832491

Overview
NameCF832491
Unique NameCF832491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832491_ssr319 microsatellite CF832491_ssr319:319..336. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1105..1928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.776e-76
Identity = 134/160 (83.75%), Postives = 145/160 (90.62%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+LTK+Q+DY+S+  +GPYKP+HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.544e-76
Identity = 136/160 (85.00%), Postives = 144/160 (90.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.544e-76
Identity = 136/160 (85.00%), Postives = 144/160 (90.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.544e-76
Identity = 136/160 (85.00%), Postives = 143/160 (89.38%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+ TGKYEKKVYVLPKHLDEKV           LT+LTK+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.867e-75
Identity = 134/160 (83.75%), Postives = 144/160 (90.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ HMKKMKNNAIVCNIGHFDNEID+LGLET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.407e-74
Identity = 133/160 (83.12%), Postives = 142/160 (88.75%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+ GLET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+S+GKYEKKVYVLPKHLDEKV           LT+LTK+QADYI V  +GPYKP HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYVPVEGPYKPAHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.407e-74
Identity = 134/160 (83.75%), Postives = 142/160 (88.75%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV  MKKMKNNAIVCNIGHFDNEID+ GLETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ+ELWKEK++GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.061e-74
Identity = 131/160 (81.88%), Postives = 143/160 (89.38%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV           LT+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 2.054e-73
Identity = 132/160 (82.50%), Postives = 141/160 (88.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV  M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+T  GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMVSDMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.020e-72
Identity = 131/160 (81.88%), Postives = 142/160 (88.75%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIMV HM+KMKNNAIVCNIGHFDNEID+LGLE YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQLELW E+++GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  326 GNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
The following BLAST results are available for this feature:
BLAST of CF832491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH2_ARATH5.776e-7683.75Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_TOBAC7.544e-7685.00Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY7.544e-7685.00Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_CATRO7.544e-7685.00Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_LUPLU2.867e-7583.75Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_SOLLC5.407e-7483.13Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH_MEDSA5.407e-7483.75Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH1_ARATH7.061e-7481.88Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_PETCR2.054e-7382.50Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_MESCR1.020e-7281.88Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832491 ID=CF832491; Name=CF832491; organism=Citrus sinensis; type=EST; length=824bp
GGGGTGCGGGCCCCACGAGTTTTTTTTTTTTTTTTATAATCATTCATCAG
TAAACAATAAGGATAACCTTATGCAGCAAAGCAAGCAAAACTTAAAACTG
CATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAAA
TCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAAC
TTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCT
ACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCT
TTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCT
GTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAG
CCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGA
AGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCTT
CTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCA
CCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCA
CATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTT
GGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCT
TAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAG
TGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGNC
AACCATGATGATGTCCTTGTTACC
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