CF832499

Overview
NameCF832499
Unique NameCF832499
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:60..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.459e-73
Identity = 132/162 (81.48%), Postives = 147/162 (90.74%), Query Frame = -1
Query:  192 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 677
            MAPIAVGD +PDG +++FDE DQLQ  SVHSLAAGKKVILFGVPGAFTPTCS+KHVPGFIEKA+ELKSK VDEI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGL+LDL +KGLG RSRRFALL+DDLKV  ANVESGG+FTVSSADDIL+AL
Sbjct:    1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2C_ARATH (Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.118e-70
Identity = 126/162 (77.78%), Postives = 145/162 (89.51%), Query Frame = -1
Query:  192 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 677
            MAPI VGD +PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGL+LDL +KGLG RSRRFALL+D+LKV  ANVESGG+FTVSSA+DIL+AL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILKAL 162          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2D_ARATH (Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 9.652e-69
Identity = 124/162 (76.54%), Postives = 144/162 (88.89%), Query Frame = -1
Query:  192 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 677
            MAPI VGD +PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW KT+ ENK VKF+ADGS +YTH LGL+LDL +KGLG RSRRFALL+D+LKV  ANVE+GG+FTVSSA+DIL+AL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.704e-65
Identity = 120/162 (74.07%), Postives = 141/162 (87.04%), Query Frame = -1
Query:  192 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 677
            MAP+AVGD LPDG L +FD +D+LQQVSVH LAAGKKV+LFGVPGAFTPTCS +HVPGFI +A++LK+K VD+IL +SVNDPFVMKAWAK++PENK VKFLADG   YT ALGL+LDLSEKGLG RSRRFALL D+LKV  AN+E GG FT+S A++IL+AL
Sbjct:    1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL 162          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2A_ARATH (Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49
Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = -1
Query:  231 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESGGD 677
            MAPI VGD +PDG +++FD+ DQLQ VSVHSLAAGKKVILFGVPGAF PTCS+ HV GFIEKA+ELKS  VDEI+C+S +DPF++ A +    ENK VKF+ DGS +Y   LGL+L++ +KGLG RSR FALL+D+LKV   NV SGGD
Sbjct:    1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFIEKAEELKSNGVDEIICLSGDDPFMITACS----ENKHVKFVEDGSGEYIQLLGLELEVKDKGLGVRSRGFALLLDNLKVIVVNVGSGGD 145          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46
Identity = 93/164 (56.71%), Postives = 121/164 (73.78%), Query Frame = -1
Query:  192 APIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 674
            A IAVGD LPD  L+YFD  D +L+ V+V  L AGKKV+LF VPGAFTPTC+ KHVPGF+ KA EL++K VD + C+SVND FVM+AW ++      V  L+DG+ +   A+G++LDLS+K  GLG RSRR+ALL +D  VK  N+E GG FT SSA+++L+AL
Sbjct:   69 ATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLKAL 232          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2E_ARATH (Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.148e-45
Identity = 96/164 (58.54%), Postives = 118/164 (71.95%), Query Frame = -1
Query:  192 APIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 674
            A I+VGD LPD  L+Y D     ++ V+V SL AGKK ILF VPGAFTPTCS KHVPGF+ KA EL+SK +D I CISVND FVM+AW K    N  V  L+DG+ ++T  LG++LDL +K  GLG RSRR+A+L DD  VK  N+E GG FT SSA+D+L+AL
Sbjct:   71 ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLKAL 234          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PR2E2_ORYSJ (Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45
Identity = 96/166 (57.83%), Postives = 123/166 (74.10%), Query Frame = -1
Query:  192 MAPIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLDLDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 677
            +A IAVGD LPD  L+YFD  D +L+ V+V  L AG+K +LF VPGAFTPTCS KH+PGFIEKA EL +K VD I C+SVND FVM+AW ++    +  V  L+DG+ + T ALG+++DLS+K  GLG RSRR+ALL DD  VK  N+E GG FT SSA+++L+AL
Sbjct:   60 VATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL 225          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.266e-28
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = -1
Query:  192 VGDPLPDGILAYFDEQDQLQQVSV---------HSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 662
            +G  +P+   AY     +L+   V         H    GKKV++  VPGAFTPTC+  HVP ++EK  ELKSK VDE++ IS NDPFV+ AW  T     ++ F  D + +++      LDLS KG+G R+ R+AL+ +DLKV+   ++  G+   SSA  +L  L
Sbjct:    2 IGSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of CF832499 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.998e-27
Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = -1
Query:  201 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLDLDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDIL 575
            GKKV++FG+PGA+T  CS +HVP +    D+ K+K +D ++C+SVNDPF +  WA+      +++F  D   K+  +LGLD DLS   LG RS R++  V+D KVKA NVE    DF V+ A+ IL
Sbjct:   73 GKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVIL 198          
The following BLAST results are available for this feature:
BLAST of CF832499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2B_ARATH6.459e-7381.48Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB... [more]
PRX2C_ARATH5.118e-7077.78Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC... [more]
PRX2D_ARATH9.652e-6976.54Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID... [more]
PRX2C_ORYSJ1.704e-6574.07Peroxiredoxin-2C OS=Oryza sativa subsp. japonica G... [more]
PRX2A_ARATH4.980e-4965.77Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA... [more]
PR2E1_ORYSJ3.021e-4656.71Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa ... [more]
PRX2E_ARATH1.148e-4558.54Peroxiredoxin-2E, chloroplastic OS=Arabidopsis tha... [more]
PR2E2_ORYSJ1.958e-4557.83Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa ... [more]
MALF3_MALFU8.266e-2839.76Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PRX2F_ARATH6.998e-2746.03Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832499 ID=CF832499; Name=CF832499; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTCCAAAAACACACCCTTTATTCCGATAAAGACGATA
AACAGTTTAAACAAAAGACTTCTCGCGTCATACATAACAATATTCGAGAT
CCACTGATTTATATTCATCCTAAGCATAGCACAGCAAAAGGAAGTAATAA
CTCAACCAACACTAAGCAGCTGGGATGGAACTGCAAATTTAAAGAGCCTG
GAGGATGTCATCAGCACTGGAGACTGTGAAATCTCCACCAGATTCAACAT
TTGCGGCCTTCACCTTGAGGTCATCAACCAAGAGAGCAAACCTCCTTGAC
CGGGTGCCAAGTCCTTTCTCACTGAGGTCAAGATCAAGCCCCAAAGCATG
GGTGTATTTTGCTGAGCCATCAGCCAGGAACTTCACGCTCTTGTTCTCAG
GAAATGTTTTGGCCCATGCCTTCATCACAAATGGGTCATTAACGCTTATG
CAGAGAATTTCATCGACGTCTTTTGACTTCAACTCATCAGCCTTCTCGAT
GAATCCAGGCACATGCTTCAAGCTGCAAGTAGGAGTGAAAGCACCGGGGA
CGCCAAAGAGGATGACCTTTTTACCGGCAGCGAGCGAGTGTACGGACACT
TGCTGCAACTGATCTTGTTCGTCGAAGTAAGCGAGAATACCGTCCGGCAA
GGGGTCACCGACTGCGATAGGAGCCATTTAGAGATAGAATCTGATCCGCG
CCTGTGATTAAATACACGATTACCACCGTAGGGCGAG
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