CF832534
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832534 vs. ExPASy Swiss-Prot
Match: MYBG_DICDI (Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28 Identity = 81/226 (35.84%), Postives = 109/226 (48.23%), Query Frame = 2 Query: 2 AAGTFKVRKPYTITKSRACWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXXXXXXXXXXXXXQKASKNVLPPLQAAMAYPSVNALAHGFAAWDDASMLVNAEKMMPS-QDKYTNLHAIEADDXXXXXXXXXXXXTVGGIGSSTRTQPSTDMPKQGNQVPVLHGIPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETV 676 AA + K RKPYTI+K R WTDEEH KFLEAL LFDRDWKKIE FVGSKTVIQIRSHAQKYF+KVQKN T + QK + + + + FA W + +MP+ + N ++ V SS R P N L P+F ++Y+F+ ++F+ + + L ++ I+ ET+ Sbjct: 25 AANSLKSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERIPPPRPKRKSIQPYPQKQKHDGMGAFIPDSLSGNHFISSSSFATW------MTYRGLMPNISESQINPSDLQKQLEQLQQAQQYIQQAVTTAQSSQRNGGLPPNPSSNNGGTTL--TPNFPKIYAFLSNLFESNGTSFTEALSDLSMIDRETM 242
BLAST of CF832534 vs. ExPASy Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18 Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 2 Query: 17 KVRKPYTITKSRACWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTI 214 K RKPYTITK R WT++EH++FLEAL+L+ R W++IE+ +G+KT +QIRSHAQK+F K++K + Sbjct: 13 KARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEV 78
BLAST of CF832534 vs. ExPASy Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18 Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 17 KVRKPYTITKSRACWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQK 202 K RKPYTITK R WT+EEH++F+EAL+L+ R W+KIE+ V +KT +QIRSHAQK+F KV+K Sbjct: 13 KTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEK 74
BLAST of CF832534 vs. ExPASy Swiss-Prot
Match: MYBH_DICDI (Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 29/54 (53.70%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 47 SRACWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNG 208 +R+ WT EE F+EA +L+D+D KKI++ V +KT++Q+RSHAQK+ LK++KNG Sbjct: 149 TRSSWTKEEERLFVEAYKLYDKDNKKIQEHVKTKTILQVRSHAQKFALKLEKNG 202 The following BLAST results are available for this feature:
BLAST of CF832534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832534 ID=CF832534; Name=CF832534; organism=Citrus sinensis; type=EST; length=679bpback to top |