CF832538

Overview
NameCF832538
Unique NameCF832538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MA2B1_CAVPO (Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.017e-42
Identity = 94/229 (41.05%), Postives = 131/229 (57.21%), Query Frame = 3
Query:    3 KEHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTT-----FSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQIG 674
            + H  +E+ VGPIPV D  GKE+++   + LET   F+TDSNGR+ ++R RDYR  W L   EPVAGNYYP+N  IY+ D K + ++L DR+ GGSS+ DG +ELM+HRRLL DD RGV EAL E         G  ++G++   +DT  + A   R   ++    P L      G S+ + H        FSG+     LP +V ++TL       +LLRL H + +G
Sbjct:  701 QRHLELEWTVGPIPVGDKWGKEIISRFDTPLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQLTVLTDRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQEPG------SGGWVRGRHLLLLDTAREAAAEHRLLAEKELLAPQLVLAPGQGPSYHHDHHEAVPRKQFSGL--RRQLPPSVRLLTLARWGPDTLLLRLEHQFALG 921          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MA2B1_MACFA (Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.108e-40
Identity = 93/226 (41.15%), Postives = 129/226 (57.08%), Query Frame = 3
Query:    3 KEHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHV--TTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQIG 674
            + H  +E+ VGPIPV D  GKEV++   + LET   FYTDSNGR+ ++R RDYR  W L   EPVAGNYYP+N  IY+ D K + ++L DR+ GGSS+ DG +ELM+HRRLL DD RGV+E L E         G  ++G++   +DT    A   R   ++    P +      G ++       T FSG+     LP +V ++TL       +LLRL H + +G
Sbjct:  708 RRHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGKMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDERGVSEPLMENG------SGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGL--RRELPPSVHLLTLASWGPEMLLLRLEHQFAVG 925          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MA2B1_BOVIN (Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 2.753e-40
Identity = 93/226 (41.15%), Postives = 131/226 (57.96%), Query Frame = 3
Query:    3 KEHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWR--NSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQIG 674
            + H  +E+ VGPIPV DG GKEV++   + L T   FYTDSNGR+ ++R R+YR  W L   EPVAGNYYP+N  IY+ D   + ++L DR+ GGSS+ DG +ELM+HRRLL DD+RGV E LN+      E  GL ++G++   +D     A   R   +     P +   +  G  +R   +  T FSG+     LP +V ++TL       +LLRL H + +G
Sbjct:  696 QRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNK------EGSGLWVRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGGGARYRLEKAPRTQFSGL--RRELPPSVRLLTLARWGPETLLLRLEHQFAVG 913          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MA2B1_FELCA (Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.696e-40
Identity = 91/226 (40.27%), Postives = 132/226 (58.41%), Query Frame = 3
Query:    3 KEHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSW--RNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQIG 674
            + H  +E+ VGPIPV DG GKE+++   + LET   FYTDSNGR+ ++R RDYR  W L   E VAGNYYP+N  IY++D   + ++L DR+ GGSS+ DG +ELM+HRRLL DD RGV EAL      L++  G  ++G++   +D +   A   R   ++    P +      G  +  + +    FSG+     LP +V ++TL   D   +LLRL H + +G
Sbjct:  705 QRHLELEWTVGPIPVGDGWGKEIISRFDTVLETKGLFYTDSNGREILERRRDYRPTWKLNQTETVAGNYYPVNSRIYIRDGNMQLTVLTDRSQGGSSLRDGSMELMVHRRLLKDDGRGVGEAL------LEDGLGRWVRGRHLVLLDKVRTAATGHRLQAEKEVLTPQVVLAPGGGAPYHLKVAPRKQFSGL--RRELPPSVHLLTLARWDQKTLLLRLEHQFAVG 922          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MA2B1_HUMAN (Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 8.010e-40
Identity = 92/226 (40.71%), Postives = 128/226 (56.64%), Query Frame = 3
Query:    3 KEHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHV--TTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQIG 674
            + H  +E+ VGPIPV D  GKEV++   + LET   FYTDSNGR+ ++R RDYR  W L   EPVAGNYYP+N  IY+ D   + ++L DR+ GGSS+ DG +ELM+HRRLL DD RGV+E L E         G  ++G++   +DT    A   R   ++    P +      G ++       T FSG+     LP +V ++TL       +LLRL H + +G
Sbjct:  707 QRHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLMENG------SGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGL--RRDLPPSVHLLTLASWGPEMVLLRLEHQFAVG 924          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MA2B1_MOUSE (Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.366e-39
Identity = 92/225 (40.89%), Postives = 133/225 (59.11%), Query Frame = 3
Query:    3 KEHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFG-QEIYSPP-LLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQI 671
            + H  +E+ VGPIPV D  GKEV++   + ++T   F+TDSNGR+ +KR  DYR  W L   EPVAGNYYP+N  IY+ D + + ++L DR+ GGSS+ DG +ELM+HRRLL+DD RGV+E L ETD       G  ++G++   + ++ D A   R    QE+ +P  +L+         R +  T FSG+     LP  V ++TL       +LLRL H + +
Sbjct:  708 QRHLELEWTVGPIPVRDDWGKEVISRFDTPMKTKGQFFTDSNGREILKRRDDYRPTWTLNQTEPVAGNYYPVNTRIYITDGQMQLTVLTDRSQGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLETD------TGDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAPQVVLSLGGSSPYHSRATPKTQFSGL--RQELPPQVHLLTLARWGPKMLLLRLEHQFAL 924          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MANA_DICDI (Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.412e-36
Identity = 84/228 (36.84%), Postives = 135/228 (59.21%), Query Frame = 3
Query:    6 EHP*VEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKK--EFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSP--PLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELD--DGKILLRLAHLYQI 671
            +H  VE I+GPI + DG+GKE+V+  T+TL T++T+Y+DS G +  KRI +YR  W+L V +P +GNY P+N   Y+QD  +  +F+++ DR+ G +S+ DG++++M+HRR L DD RGV + +NE+  ++          K  F  D         R     +  P  P+   T++  + W + +   +S + S+  LP+ + I TLQ LD  D  ILLR+ ++YQI
Sbjct:  704 DHLEVEEIIGPIDISDGIGKEIVSRYTTTLVTDQTWYSDSQGMEMQKRITNYRPSWNLTVVQPTSGNYVPVNAIAYIQDPNQSLQFTIVTDRSRGCASLRDGQLDMMMHRRTLKDDGRGVGQPMNESTQIV-------TTSKLIFH-DISSYAQSHYRPAALSLSHPLLPMFTTTQQSSNDWNSQYQGVYSPLTSASPLPNGLKIQTLQWLDNQDNTILLRIENIYQI 923          
BLAST of CF832538 vs. ExPASy Swiss-Prot
Match: MAN2_DROME (Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3
Query:   66 EVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVL 392
            E+V  + + +++   FYTD NG  FIKR R  +         P+  NYYPI  G++++D     +LL  + LGGSS+  GE+E+M  RRL  DD RG+ + + +   VL
Sbjct:  852 EIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKL--------PLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKPVL 952          
The following BLAST results are available for this feature:
BLAST of CF832538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MA2B1_CAVPO5.017e-4241.05Lysosomal alpha-mannosidase OS=Cavia porcellus GN=... [more]
MA2B1_MACFA2.108e-4041.15Lysosomal alpha-mannosidase OS=Macaca fascicularis... [more]
MA2B1_BOVIN2.753e-4041.15Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B... [more]
MA2B1_FELCA4.696e-4040.27Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2... [more]
MA2B1_HUMAN8.010e-4040.71Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN... [more]
MA2B1_MOUSE1.366e-3940.89Lysosomal alpha-mannosidase OS=Mus musculus GN=Man... [more]
MANA_DICDI2.412e-3636.84Lysosomal alpha-mannosidase OS=Dictyostelium disco... [more]
MAN2_DROME4.426e-1437.61Alpha-mannosidase 2 OS=Drosophila melanogaster GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02A08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832538 ID=CF832538; Name=CF832538; organism=Citrus sinensis; type=EST; length=674bp
GGAAAGAGCATCCTTAAGTTGAATTTATTGTTGGGCCTATACCAGTTGAT
GATGGACTTGGTAAGGAAGTCGTGACTCATATAACAAGTACATTGGAAAC
CAATAAAACTTTCTACACGGATTCTAATGGACGTGATTTTATCAAAAGGA
TTCGTGATTATAGAACAGACTGGGACTTGGAAGTGAATGAACCAGTTGCT
GGAAATTATTACCCAATAAATCTTGGAATTTACATGCAAGATGTTAAAAA
AGAATTTTCACTTTTGGTGGATCGGGCCCTTGGAGGATCTAGCATAGTGG
ATGGAGAAGTAGAATTGATGCTTCATAGGAGATTGTTGCTTGATGATTCA
AGGGGCGTTGCCGAGGCGCTAAATGAAACTGACTGCGTGCTTGATGAATG
TAAAGGACTGACAATCCAAGGGAAATATTATTTCAGAATTGATACCATAG
GAGACGGTGCTAAATGGCGTCGTACTTTTGGCCAGGAGATATATTCACCT
CCCCTTTTAGCCTTTACCGAGGAGGATGGAGATAGCTGGAGGAATTCTCA
TGTAACCACTTTCTCAGGGATTGATTCCTCCTATAGTTTACCTGATAATG
TTGCTATTATTACGCTTCAGGAGCTTGATGATGGAAAGATTCTCCTTCGG
TTAGCTCATTTATATCAGATTGGC
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