CF832598

Overview
NameCF832598
Unique NameCF832598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2185 contig Csv1_Contig2185:904..1753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIC2_ARATH (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.515e-45
Identity = 95/128 (74.22%), Postives = 104/128 (81.25%), Query Frame = -1
Query:  467 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLELMQAVRVGHSKL 850
            IRG+ADAAQAPE FTT P+LAIPKAI  AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLGHPLGCSGARILVTLLGVLR KK             GASALVLE M    +G+S L
Sbjct:  288 IRGYADAAQAPELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFMSEKTIGYSAL 415          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIC1_ARATH (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 82/118 (69.49%), Postives = 99/118 (83.90%), Query Frame = -1
Query:  497 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLELM 850
            I+G+ DAAQ PE+FTTAP+LAIPKAIA+AGLE+SQ+DYYEINEAF+VVA+ANQKLLG+ PE+VN +GGAVSLGHPLGCSGARIL+TLLG+L+ +              GASALVLEL+
Sbjct:  286 IKGYGDAAQEPEFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.035e-31
Identity = 69/116 (59.48%), Postives = 88/116 (75.86%), Query Frame = -1
Query:  503 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLE 850
            I G+ +AAQ PE FTT+PSLAIPKA+ +AG+EASQ+DYYEINEAFSVVA+AN K+LGLDPE+VN +GG V++GHPLG SG+RI+ TL  +L  K              GAS++V+E
Sbjct:  278 IIGWGEAAQDPERFTTSPSLAIPKALKHAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTLAYILAQKDAKIGVAAVCNGGGGASSIVIE 393          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = -1
Query:  503 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLE-ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLE 850
            I+G+ +AA  P  FT APSLA+PKA+ +AG+E  + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGCSGAR++VTLL +L+ +              GAS++V+E
Sbjct:  280 IKGWGEAAHQPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIE 396          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.773e-27
Identity = 60/117 (51.28%), Postives = 84/117 (71.79%), Query Frame = -1
Query:  503 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLE-ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLE 850
            ++G+ +AA  P  FT APSLA+PKA+ +AG+E  + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGCSGAR++VTLL +L+ +              GAS++V+E
Sbjct:  280 VKGWGEAAHLPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSVVIE 396          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.509e-26
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = -1
Query:  503 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLE 850
            I G+ADA QAP  F TAP+LAIPKA+ NAG+  SQ+D +EINEAF+VV +AN K+L +D  ++N +GGAV+LGHP+G SG RI+VTL  +L++K              G++ALVLE
Sbjct:  297 IIGYADAEQAPIEFPTAPALAIPKALKNAGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLTHLLQNKNLKYGVAAICNGGGGSTALVLE 412          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.390e-26
Identity = 59/120 (49.17%), Postives = 85/120 (70.83%), Query Frame = -1
Query:  491 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLELMQA 850
            I G+ +AA+ P  FT AP+LA+PKA+ +AGL   ++D++E+NEAFSVV +AN +L+ +  E++N +GGAV++GHPLGCSGARI+VTLL VL  +              GASA+V+E + A
Sbjct:  280 ISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGVAGVCNGGGGASAVVIEKIDA 399          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.277e-25
Identity = 58/116 (50.00%), Postives = 83/116 (71.55%), Query Frame = -1
Query:  503 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXGASALVLE 850
            I G+ +AA+ P  FT AP+LA+PKA+ +AGL   ++D++E+NEAFSVV +AN +L+ +  E++N +GGAV++GHPLGCSGARI+VTLL VL  +              GASA+V+E
Sbjct:  280 ISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVKIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGAAGVCNGGGGASAIVIE 395          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = -1
Query:  575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850
            I  FADAA  P  F  AP+ A+PK +  AGL+   I  +E+NEAFSVV +AN K+L +DP++VN HGGAVSLGHP+G SGARI+V L   L+
Sbjct:  309 IAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNVHGGAVSLGHPIGMSGARIVVHLAHALK 400          
BLAST of CF832598 vs. ExPASy Swiss-Prot
Match: THIL_MOUSE (Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.256e-21
Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = -1
Query:  575 IRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 850
            I  FADAA  P  F  AP+ A+PK +  AGL+   I  +E+NEAFSVV +AN K+L +DP++VN HGGAVSLGHP+G SGARI+V +   L+
Sbjct:  309 IAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNIHGGAVSLGHPIGMSGARIVVHMAHALK 400          
The following BLAST results are available for this feature:
BLAST of CF832598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
THIC2_ARATH5.515e-4574.22Probable acetyl-CoA acetyltransferase, cytosolic 2... [more]
THIC1_ARATH9.112e-4069.49Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabi... [more]
THIL_SCHPO2.035e-3159.48Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIL_YEAST3.971e-2752.14Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SACBA6.773e-2751.28Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
THIL1_DICDI1.509e-2653.45Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
THIA_CANTR4.390e-2649.17Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
THIB_CANTR1.277e-2550.00Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL_RAT1.461e-2156.52Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]
THIL_MOUSE3.256e-2155.43Acetyl-CoA acetyltransferase, mitochondrial OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832598 ID=CF832598; Name=CF832598; organism=Citrus sinensis; type=EST; length=850bp
CCTTTTTTTTTTTTTTTTGACCACACAAAAGGCCATATAAAGGTGTTTCA
CTGGATTTGCTCTGACAGCAGCACAAGTCTAACAACATACCAATATTGCT
TGCTACAGTCAGCCAAGCGTCATTCACATAAGATCAAGTCATAAGAGAAG
CAGTGGTCTTATTTTAGTGATCTTCACTCTTCACATATTTCTCTAGCTCA
AGCTATATGATGAGCTACAGGGATTGGTGCTCCTTCGCCACCAATGCTTT
ACCACTTTACAATGGTATGATGACTTATGCGGGTAATCATTTAATACATC
TATCCTATCTACCTTTCTTACTAGGGTCGATCAAGCTGATACATTTCCCT
TTTTATTTATTTTTTTTCTCTTTTAGCTTTCTCATTCAAGTAGACAACTT
AACAAAGAGATAAGAGACAATAGCACAGGAGGTGATGTTCCACAGTCAGT
ATACATCATCAATTCATAGCTTGGAATGTCCCACCCGCACCGCTTGCATG
AGCTCAAGAACAAGAGCGGATGCCCCCCCTCCACCATTGCAGATGCCACC
AACGCCGTACTTCCCCTTCTTATGTCTCAGTACCCCCAATAATGTGACTA
AGATACGAGCTCCACTACACCCTAACGGATGACCCAGGGATACGGCTCCA
CCATGCGCATTAACCTGTTCAGGATCAAGACCAAGCAGTTTTTGATTGGC
AATAGCTACAACAGAAAAAGCTTCGTTTATTTCATAGTAATCAATCTGAG
AAGCTTCCAAGCCAGCATTTGCTATGGCTTTTGGTATTGCAAGGGATGGA
GCAGTTGTAAACCACTCTGGAGCCTGAGCTGCGTCAGCAAATCCCCTAAT
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