CF832600

Overview
NameCF832600
Unique NameCF832600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6290 contig Csv1_Contig6290:226..1068. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF832600 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.315e-16
Identity = 52/142 (36.62%), Postives = 75/142 (52.82%), Query Frame = -1 
Query:  433 TNGQCPLDVIQ*SSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGDHE 843
            T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  + D  +  L + D+E
Sbjct:   65 TGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201
[Close]
BLAST of CF832600 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.445e-15
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = -1 
Query:  439 CPLDVIQ*SSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGD 831
            CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L + D
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207
The following BLAST results are available for this feature:
BLAST of CF832600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC5.315e-1636.6221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.445e-1535.25Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02B22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832600 ID=CF832600; Name=CF832600; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTGGATTGAAAGATTCCAAAATCATATTAGTCCCTA
TAGCACCTATTCGAAGATAGCCCAAATACTGATTTTAAACATCATTGTTT
CAATGGAAAATGCTAACTGTTGTGGTTTTATCACAATATAAAACATTGAC
AAAGCACTGATAATACGTATGCATGGAGACTTAAAAGATGTATACATAAC
ATGAGTAGAGATTAACAACAGCAAAAGGATCACAGGCGGTGTTATTTTTA
TTCTGTAATAGAGATAAAAGGTTACTAGCCTGGTCTATTATTTAGAATGA
TACAGCTAAGTTCATTCATTACGCGGTCATTGATATTGCTTCAGCAGCTT
CAAAAAACCTTGATATTGCGTTAGCAGCTTGAAGTAGCCTTGAGCTTTCC
TCTGATGGAAAAAACAGAACATTCAAAGCCGGTTCATGATCACCAACTAG
AAGCAGACGTCGAACGCCATCCTTAGTTGAAACGCCAATTTTGTTGCAGC
GTCTAGGACAAGATAGACAGACACTCGGACAATGGACAATATTGTATACA
CCACCATATGAAAAATTTCCAGCTTTCTCAATCTTAAACCAATTTAGCAA
CGTTTCAGCTCCTGGGTGGCCCTCACTTCCGCCGGTTACAATTAATGGAT
CGTCATAGCTATCAACTTTCCACAATGGTTCTTCATTACAGGGCTTAACA
GAAACTTTTACGGGGAATCTCAGGTTGACATCAGTGGATACCTTGACAAT
TTTGTAATTGTCGTACGGAAGTAATCTTAAATTATCTCCCCTTTCGCTAG
GAGAACTTTATTGGATAACGTCCAAAGGACACTGTCCATTTGT
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