CF832601

Overview
NameCF832601
Unique NameCF832601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length537
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig360 contig Csv1_Contig360:759..1295. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832601 vs. ExPASy Swiss-Prot
Match: APR1_ARATH (5'-adenylylsulfate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=APR1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 5.793e-36
Identity = 70/88 (79.55%), Postives = 81/88 (92.05%), Query Frame = 3
Query:    3 VVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSEKRDVDSLMAFVDALR 266
            VVLYAPWC FCQAME SY ELADKLAG+G+KV KFRADGDQKE+AKQ+LQLGSFPTIL FPK+SS+PIKYPSEKRDV+SL +F++ +R
Sbjct:  378 VVLYAPWCPFCQAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTILVFPKNSSRPIKYPSEKRDVESLTSFLNLVR 465          
BLAST of CF832601 vs. ExPASy Swiss-Prot
Match: APR2_ARATH (5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=APR2 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 4.904e-35
Identity = 69/88 (78.41%), Postives = 78/88 (88.64%), Query Frame = 3
Query:    3 VVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSEKRDVDSLMAFVDALR 266
            VVLYAPWC FCQAME SY+ELA+KLAG GVKV KFRADG+QKE+AKQ+LQLGSFPTIL FPK + + IKYPSE RDVDSLM+FV+ LR
Sbjct:  367 VVLYAPWCPFCQAMEASYIELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILLFPKRAPRAIKYPSEHRDVDSLMSFVNLLR 454          
BLAST of CF832601 vs. ExPASy Swiss-Prot
Match: APR3_ARATH (5'-adenylylsulfate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=APR3 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 8.365e-35
Identity = 68/88 (77.27%), Postives = 80/88 (90.91%), Query Frame = 3
Query:    3 VVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSEKRDVDSLMAFVDALR 266
            VVLYAPWC FCQAME S+ ELADKL G+GVKV KFRADGDQK++AK++LQLGSFPTIL FPK+SS+PIKYPSEKRDVDSL +F++ +R
Sbjct:  371 VVLYAPWCPFCQAMEASFDELADKLGGSGVKVAKFRADGDQKDFAKKELQLGSFPTILVFPKNSSRPIKYPSEKRDVDSLTSFLNLVR 458          
The following BLAST results are available for this feature:
BLAST of CF832601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
APR1_ARATH5.793e-3679.555'-adenylylsulfate reductase 1, chloroplastic OS=A... [more]
APR2_ARATH4.904e-3578.415'-adenylylsulfate reductase 2, chloroplastic OS=A... [more]
APR3_ARATH8.365e-3577.275'-adenylylsulfate reductase 3, chloroplastic OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02B23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832601 ID=CF832601; Name=CF832601; organism=Citrus sinensis; type=EST; length=537bp
TTGTTGTGCTGTATGCCCCATGGTGCCAATTCTGCCAGGCCATGGAAGGA
TCGTATGTTGAGCTGGCTGACAAGTTAGCAGGGAATGGTGTGAAGGTGGG
CAAGTTCAGAGCAGATGGTGACCAGAAGGAATATGCAAAGCAAAAATTGC
AGCTGGGAAGCTTCCCAACAATACTATTTTTCCCTAAACACTCTTCGAAG
CCGATAAAGTACCCCTCAGAAAAGAGGGATGTAGATTCACTGATGGCTTT
TGTGGATGCCCTCCGGTAATTGAATCATAGATTTAGCAGCAATACAGCCG
ATTGGAAAATGCAAAGTGGTAGGAGCTGGAATTCATCACAATTAAATTTC
TTTTCCCAGCCCTAGAACCCGGGGGCCTGTAATGGACCTTGGGCGTTTTT
GTGTATTTTTGGTGTAAGGGTCTTTTTTGCAATTATTTTTTCAAATGCGT
TTCTGGAAAGATTTTCCTTCAGTCGGAGTGTGTTATAATATTGTTTTCAG
GAGTATGAGAACAGCTGTTGGTGAAAAAAAAAAAAAA
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