CF832626

Overview
NameCF832626
Unique NameCF832626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832626 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.608e-16
Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = -2 
Query:  305 KKKIYSVCTMTYIGFGALIDEELSYKVKGQPGVLWVLPDSYNDVPNKDYGGDLFVDGKVI-HRPQY---------RFTERQQ---RPRTGRREKTQADRRRFWAQNQSAPSQQPTSMSNQNPAQGGGT 649
            + KIYSV T  Y  FGAL+ E+LS+K+K    V WVLPDSY DV NKDYGG+ F+DGK + + P+Y         R  ER +   RPR   R +    RR   A     P Q+P       P   GG+
Sbjct:  135 RMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMA--GGPPPQRPPMGGPPPPPHIGGS 260
[Close]
BLAST of CF832626 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = -2 
Query:  332 KKKIYSVCTMTYIGFGALIDEELSYKVKGQPGVLWVLPDSYNDVPNKDYGGDLFVDGKVIHRPQYRFTERQQRPRTGRREKTQADRRRFWAQNQSAPSQQPTSMSN 649
            KK +Y+  T TY GF   + EE S K KG PGVLWVLPDSY DV NKDYGGD +V+G++I   QY   + +Q   +  + K    +R      Q  P Q+ T  S+
Sbjct:  125 KKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEII-PCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQRRPKQEATPESS 229
The following BLAST results are available for this feature:
BLAST of CF832626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UMP1_ARATH2.608e-1642.19Uncharacterized protein At3g15000, mitochondrial O... [more]
DAG_ANTMA3.407e-1644.34DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02C17_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832626 ID=CF832626; Name=CF832626; organism=Citrus sinensis; type=EST; length=650bp
TTTTTTTTTTTTTTTAAAAAGCAAGAGCTGTTCTTCTTCTCTTTACATAA
CAAATAACGTTTCCAGGCTCCCACAACATCACCTCCTATTTGATTTTTCA
ATAATTCCTCAATAACTATATTCACATATGTTCATGACTTGAAATATGCA
TATACTTGCCATGGAACATAAAAAGCAAGGGAACTCAGTAATTATCCACC
GAATAAGAAATGCCACTGACAACACAAACCCAATAACCCCATAACTATAC
TGTGAATTCTCAAGCACTCTTCTGGTTATTTTGTCCTTGGTTTATAGACA
AATTTGTCCCACCACCTTGAGCAGGATTCTGGTTACTCATTGAGGTTGGT
TGCTGCGATGGAGCACTCTGGTTCTGAGCCCAGAACCTTCTCCTGTCGGC
CTGTGTTTTTTCTCGACGCCCTGTGCGTGGCCTTTGCTGCCTCTCAGTGA
ATCTATATTGTGGTCTATGGATAACTTTGCCATCAACAAACAAATCCCCT
CCATAATCTTTGTTGGGAACATCATTATATGAATCCGGCAAAACCCAAAG
AACTCCAGGCTGACCTTTAACTTTGTAAGAAAGCTCCTCATCAATAAGTG
CACCAAACCCAATATATGTCATCGTACAGACTGAGTATATCTTCTTCTTC
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