CF832628

Overview
NameCF832628
Unique NameCF832628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832628 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = -3 
Query:  471 KETIMLDGCDYQHWLIVMEFPNPSGLSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI 797
            +ETIML GCDY HWLIVMEFP     + E+MI+ Y+ TLA V+GS EEAKK +Y+  TTTYTGF   + EE S K KG PGVLWVLPDSYIDV NKDYGGD +V+G++I
Sbjct:   76 RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEII 184
[Close]
BLAST of CF832628 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.705e-33
Identity = 66/115 (57.39%), Postives = 90/115 (78.26%), Query Frame = -3 
Query:  456 KETIMLDGCDYQHWLIVMEFPNPSGLSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI-HRPQY 797
            KETI+LDGCD++HWL+V+E P     + +E+I++Y+KTLA +VGSE+EA+ KIYSV T  Y  FGAL+ E+LS+K+K    V WVLPDSY+DV NKDYGG+ F+DGK + + P+Y
Sbjct:   87 KETILLDGCDFEHWLVVVEPPQGEP-TRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKY 200
The following BLAST results are available for this feature:
BLAST of CF832628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DAG_ANTMA1.895e-3665.14DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
UMP1_ARATH5.705e-3357.39Uncharacterized protein At3g15000, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02C18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832628 ID=CF832628; Name=CF832628; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTAGTTGCAAGAGCTGTTCTTCTTCTCTTTACATA
ACAAATAACATTTCAAGTCTCCCACAACATCATCTCCTATTTGATTTTTC
AATAATTCCTCAATAACTATATTCACATATGTTCATGACTTGAAATATGC
ATATAATTGCCATGGAACATAAAAAGCAAGGGAACTCAGTAATTATCCAC
CGAATAAGAAATGCCACTGACAACACAAACCCAATAGCCCCATAACTATA
CTGTGAATTCTCAAGCACTCTTCTGGTTATTTTGTCCTTGGTTTATAGAG
AAATTTGTCCCACCAGCTTGAGCAGGATTCTGGTTACTCATTGAGGTTGG
TTGCTGCGATGGAGCACTCTGGTTCTGAGCCCAGAACCTTCTCCTGTCGG
CCTGTGTTGTTTCTCGACGCCGTGTGCGTGGCCTTTGCTGCCTCTCAGTG
AATCTATATTGTGGTCTATGGATAACTTTGCCATCAACAAACAAATCCCC
TCCATAATCTTTGTTGGGAACATCAATATATGAATCCGGCAAAACCCAAA
GAACTCCAGGCTGACCTTTAACTTTGTAAGAAAGCTCCTCATCAATAAGT
GCACCAAACCCAGTATATGTCGTCGTACAGACTGAGTATATCTTCTTCTT
CGCTTCCTCCTCACTGCCAACAACAGCAGCGAGTGTTTTGACATAAGCGT
TGATCATTTCCTCCTCACTGAGCCCTGAGGGATTAGGAAACTCCATAACA
ATCAGCCAATGCTGGTAATCGCACCCGTCGAGCATTATTGTCTCTTTCG
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