CF832629

Overview
NameCF832629
Unique NameCF832629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832629 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.994e-42
Identity = 79/130 (60.77%), Postives = 104/130 (80.00%), Query Frame = 1
Query:   58 SPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSGLSEEEMINAYVKTLAAVVGSEEEAKNKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI-HRPQY 444
            S LNDP+PNWSNRPPKETI+LDGCD++HWL+V+E P     + +E+I++Y+KTLA +VGSE+EA+ KIYSV T  Y  FGAL+ E+LS+K+K    V WVLPDSY+DV NKDYGG+ F+DGK + + P+Y
Sbjct:   72 SSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEP-TRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKY 200          
BLAST of CF832629 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.188e-36
Identity = 76/133 (57.14%), Postives = 91/133 (68.42%), Query Frame = 1
Query:   31 RFKTPGSSYSPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSGLSEEEMINAYVKTLAAVVGSEEEAKNKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI 429
            R  T G   S  N+ + N      +ETIML GCDY HWLIVMEFP     + E+MI+ Y+ TLA V+GS EEAK  +Y+  TTTYTGF   + EE S K KG PGVLWVLPDSYIDV NKDYGGD +V+G++I
Sbjct:   54 RALTDGEYSSRRNNNNNNSGEE--RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEII 184          
The following BLAST results are available for this feature:
BLAST of CF832629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UMP1_ARATH2.994e-4260.77Uncharacterized protein At3g15000, mitochondrial O... [more]
DAG_ANTMA4.188e-3657.14DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02C18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832629 ID=CF832629; Name=CF832629; organism=Citrus sinensis; type=EST; length=679bp
CCGTGACCGGACCCAATTTGCAACCCGGCCCGTTTCAAAACCCCCGGTTC
GAGCTACTCGCCCCTCAACGACCCGTCTCCGAATTGGAGCAACCGGCCGC
CGAAAGAGACAATAATGCTCGACGGGTGCGATTACCAGCATTGGCTGATT
GTTATGGAGTTTCCTAATCCCTCAGGGCTCAGTGAGGAGGAAATGATCAA
CGCTTATGTCAAAACACTCGCTGCTGTTGTTGGCAGTGAGGAGGAAGCGA
AGAATAAGATATACTCAGTCTGTACGACGACATATACTGGGTTTGGTGCA
CTTATTGATGAGGAGCTTTCTTACAAAGTTAAAGGTCAGCCTGGAGTTCT
TTGGGTTTTGCCGGATTCATATATTGATGTTCCCAACAAAGATTATGGAG
GGGATTTGTTTGTTGATGGCAAAGTTATCCATAGACCACAATATAGATTC
ACTGAGAGGCAGCAAAGGCCACGCACACGGCGTCGAGAAACAACACAGGC
CGACAGGAGAAGGCTCTGGGCTCATAACCAGAGTGCTCCATCGCAGCAAC
CAACCTCAATGAGTAACCAGAATCCTGCTCAAGCTGGTGGGACAAATTTC
TCTATAAACCAAGGACAAAATACCCAGAAGAGTGCTTGAGAATTCACAGT
ATAGTTATGGGGCTATTGGGCTTGTGTTG
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