CF832654

Overview
NameCF832654
Unique NameCF832654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig942 contig Csv1_Contig942:443..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832654 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19
Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 2
Query:    2 TDLHLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKLCNNVGR-SFEDGVRRLVL 298
            TD+++ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC+++GR S +DG  RL L
Sbjct:  102 TDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CF832654 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17
Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 2
Query:    2 TDLHLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKLCNNVGRSFEDGVRRLVLVRDDEPAF 322
            TDL++ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:  109 TDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
The following BLAST results are available for this feature:
BLAST of CF832654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC2.051e-1946.5321 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU5.586e-1739.25Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02D10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832654 ID=CF832654; Name=CF832654; organism=Citrus sinensis; type=EST; length=521bp
CACTGATCTCCACTTGAGATTCTCAGTGTTGCTATCTGGACGTGACTATT
GTAACGAACAACCGTTGTGGAAAGTTGATAATTATGACGCGGCATCAGGC
AAATGGTTTATAACAACCGGGGGACTTGATGGTCACCCTGGAGCTGAAAC
TTTGCTAAATTGGTTTAAGCTTGAGAAAATTGGAAATTTTCCAGGTACAT
ACAAAATCGTTCATTGTCCATCCGTTTGCGAGTCTTGTGTCAAACTCTGC
AACAACGTTGGCCGTTCGTTTGAGGATGGCGTTCGACGTCTGGTTCTGGT
TCGTGATGATGAGCCGGCATTTCCTGTTGTGTTAATTCCCGCTACAGAAA
GATCAACGTCTGTGTAATCAATGTACCCTAACCAGCTAGCGGTATTATTA
TTCTAAATAACGGACCAGGCTAGCTGCTCTTTAATCTCTAGGATTAAAAT
TATGAATAAGAAACCCTGTGATCCTTTCGGGGTTAATAAATTCTACTGTT
GGTGTAAAAAAAAAAAAAAAA
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