CF832687

Overview
NameCF832687
Unique NameCF832687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11426 contig Csv1_Contig11426:54..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.208e-15
Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = -2
Query:  207 LLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPAPSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 716
            LL   G+  +EI    +KFTAIG+YLD   +  L  +WKGK    LA   DFF  +++ P EKF ++ +I  + G QY  ++      +   A  Y      A+EK ++ F+ + F   DS++  H P  S T       +  E S   +EN  + E + +  + G +GVSP
Sbjct:   31 LLGGAGVRGLEIGGNFVKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSP-ESLTISFGKAGDIPETSNAVIENKKLSEAVIESVI-GEKGVSP 200          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -2
Query:  207 LLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPAPSPTAEIVFTSEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 716
            LL   G+  +EI+   +KFTAIGVYL+   ++ L  +WKGK    L+   +FF  +++ P EKF ++ +I  + G QY  ++      +   A  Y      A+EK ++ FQ++ F   DS++  H P    +  I F   G   E S   +EN  + E + +  + G +GVSP
Sbjct:   33 LLGGAGVRGLEINGNFVKFTAIGVYLEESGVAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQWKAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSP---ESLTISFGKNGAIPEVSNAVIENKKLSEAVIESII-GEKGVSP 202          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14
Identity = 55/174 (31.61%), Postives = 82/174 (47.13%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G   +EI    + FTAIGVYL+   +S L  +WKGK    LA + DFF  + + P EKF RI ++K + G QY  ++E         A  Y     +A+EK  E  +++ F   + I +       +  I F  EG   E     +E+  + E I +  + G  GVSP
Sbjct:   31 LFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESII-GKHGVSP 203          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = -2
Query:  207 GLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 701
            G   +EI    IKFTAIGVYL+   +  L  +WKGK    L    DFF  +VS P EKF ++ +I  + G QY  ++             Y      A+EK +E F+ + F     I +   +P  +  I F+ +G   E   + +EN  + E + +  + G  GVSP
Sbjct:   38 GERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILF-TQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESII-GKHGVSP 203          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13
Identity = 50/168 (29.76%), Postives = 85/168 (50.60%), Query Frame = -2
Query:  207 GLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 701
            G+  +EI    IKFTAIGVYL+ + ++ L  +WKGK    +A   DFF  +V+ P EKF ++  I  + G QY  ++            K+    + A +K ++ F+++ F   + I +   +P  +  I F+ +G   E     +EN  + E + +  + G +GVSP
Sbjct:   36 GVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILF-TQSPQGSLTISFSKDGSIPEKENAIIENKQLSEAVLESII-GKKGVSP 201          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13
Identity = 52/168 (30.95%), Postives = 83/168 (49.40%), Query Frame = -2
Query:  207 GLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 701
            G+  +EI    I FTAIG+YL+ + +  L  +WKGK G  LA   DFF  + + P EKF  + +I  + G QY  ++             Y     SA++K  + F+ + F   S I +    PS T +I F+ +G   +D  + +EN  + + + +  + G  GVSP
Sbjct:   33 GVRGLEIGGKFIAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTH-TPSGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESII-GEHGVSP 198          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.689e-13
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGKEDS-----KIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G   +EI    +KFTAIGVYL+   +  L ++WKGK    L    +FF  +V+ P EKF R+ +I  + G QY  ++         G   Y      A+EK ++ F+S+ F   + I +     SP   ++  S  K+DS        +EN  + E + +  + G  GVSP
Sbjct:   30 LFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF---TQSPLG-LLTISFAKDDSVTGTANAVIENKQLSEAVLESII-GKHGVSP 201          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.736e-13
Identity = 51/171 (29.82%), Postives = 76/171 (44.44%), Query Frame = -2
Query:  207 LLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKD-SVIAYHFPAPSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 713
            L   G   +EI    +KFTAIGVYL+   L  L  +WK K    LA   DFF  +V+ P EKF R+ +I  + G QY  ++             Y      A+EK++  FQ++ F    S++    P  + T   +            +EN  + E + +  + G  GVSP
Sbjct:   27 LAGAGNRGLEIEGKFVKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESII-GKHGVSP 196          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.736e-13
Identity = 51/174 (29.31%), Postives = 80/174 (45.98%), Query Frame = -2
Query:  207 LLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 713
            L   G+  ++IH   +KFTAI VYL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY  ++             Y      A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:   31 LAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.736e-13
Identity = 54/177 (30.51%), Postives = 83/177 (46.89%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGKEDS-----KIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G   +EI    +KFTAIGVYL+   +  L ++WKGK    L    +FF  +V+ P EKF R+  I  + G QY  ++         G   Y      A+EK ++ F+S+ F   + I +     SP   ++  S  K+DS        +EN  + E + +  + G  GVSP
Sbjct:   30 LFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF---TQSPLG-LLTISFAKDDSVTGTANAVIENKQLSEAVLESII-GKHGVSP 201          
The following BLAST results are available for this feature:
BLAST of CF832687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CFI_EUSGR3.208e-1531.98Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_GENTR3.547e-1431.61Chalcone--flavonone isomerase OS=Gentiana triflora... [more]
CFI_CANGE6.050e-1431.61Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_CAMSI7.901e-1431.55Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_VERHY1.348e-1329.76Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI_ALLCE1.348e-1330.95Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]
CFI1_PETHY6.689e-1330.51Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI_TOBAC8.736e-1329.82Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI3_SOYBN8.736e-1329.31Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI3_PETHY8.736e-1330.51Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832687 ID=CF832687; Name=CF832687; organism=Citrus sinensis; type=EST; length=807bp
ACTCGAGAAATTTTCTTGAAGGACCTTAGCAAAGCAAATTTCCATTAAAA
TAGAAGCATGGTTGCGGGGTAAACACGTCATTCAAATTGCACAAATTTAC
AGCAATTCCAAAACCCAAGTGAAGAAGCACTTTTATTAGAAAGCGCAGAG
CTGCTTCATTTTGATAACTCAGCTGAGAGAGTATTGGCTAGAGATGATGT
TGTTGTAGGAGACACTCCCCTTGCTCCACCCAAGTACCATTTCTTGATCA
TCTCAACCACATTCGCATTCTCCACTTTGATTTTTGAGTCCTCCTTTCCT
TCACTTGTAAACACTATCTCAGCAGTAGGGGATGGTGCCGGAAAATGATA
AGCAATCACAGAGTCCTTCTTAAAATACTTGGATTGGAAGAATTCAACGA
TTTTCTCAAGGGCAGATTCTTCCTCTTCTTCATATTTGTCAGCTCCGGCC
AATCTGTCCCTCACCGCACTTTCTAACTGAACCCCATATTGTGACCCCTT
GATCTCCTTGATCACAACAATTCTCAAAAATTTCTCTACTGGAGCAGAGA
CAAGAGCATCAAAGAAGTCATCATCTTGTGCAAGGGAACTTCCCTGTTTG
CCCTTCCACTGTTGCAAGTGACTCAAAATTTCAGGATCCAAGTATACTCC
AATTGCCGTGAACTTGATTTGGAGAAAGTGTATCTCAATGTCTGTTAAAC
CTGTTGCAAGCAGCAGCACCCCCAACTCAACAAGTTTCATAATGGCCATT
AAACACCTCTAAAATGACAGAATTGTTCATAATGAAATGAAATGGATTGA
TTATTGC
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