CF832688

Overview
NameCF832688
Unique NameCF832688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1024 contig Csv1_Contig1024:1..649. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832688 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1 
Query:  412 LLATGLRDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQY 639
            L   G+R ++IH   +KFTAI VYL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY
Sbjct:   31 LAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQY 107
[Close]
BLAST of CF832688 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1 
Query:  412 LLATGLRDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQY 639
            L   G+R ++IH   +KFTAI +YL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY
Sbjct:   31 LAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQY 107
The following BLAST results are available for this feature:
BLAST of CF832688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CFI3_SOYBN7.351e-1142.86Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI2A_SOYBN9.601e-1141.56Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02E07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832688 ID=CF832688; Name=CF832688; organism=Citrus sinensis; type=EST; length=649bp
GAACACAGTCACTTGCTTAAATATCAGCTTCACCCTTCATTTGTATTTTA
TCAAATTATCAGTTGCTTTTTCTCCATACTTCATCATTTTCCAATAATTT
CCCACTAAAGATTACCAGTGAGTCTCTCTTTTAAGTTGATGTTAACAACT
TTTTTGTTAATCAAGCTAATGAAGCTATCTATATATTTATTCGCAAATAC
TGTGACCTAATTTTGGTTTTGTGGAACATTTAGGGGCCACTGAAGTTGTA
ATGGTGGATGAAATCCCATTTCCTCCTCAGATCACCACCACCAAGCCGTT
GAATCTTCTGGGTCATGGCAATAATCAATCCATTTCATTTCATTATGAAC
AATTTTGTCATTTTAGAGGTGTTTAATGGCCATTATGAAACTTGTTGAGT
TGGGGGTGCTGCTGCTTGCAACAGGTTTAAGAGACATTGAGATACACTTT
CTCCAAATCAAGTTCACGGCAATTGGAGTCTACTTGGATCCTGAAATTTT
GAGTCACTTGCAACAGTGGAAGGGCAAACAGGGAAGTTCCCTTGCACAAG
ATGATGACTTCTTTGATGCTCTTGTCTCTGCTCCAGTAGAGAAATTTTTG
AGAATTGTTGTGATCAAGGAGATCAAGGGGTCGCAATATGGGGTTCAGT
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