CF832707

Overview
NameCF832707
Unique NameCF832707
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832707_ssr217 microsatellite CF832707_ssr217:217..228. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1541 contig Csv1_Contig1541:31..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.756e-104
Identity = 186/219 (84.93%), Postives = 200/219 (91.32%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F AV+VAI VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSPD +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R+ WE+EAA+VVEDVKK+PEAATNGIVLRRRLQLMMYNNMYRIMFDRRFES+DDPLFN+LKALNGER+RLAQSF+YNYGDFIPILR
Sbjct:   14 FVAVLVAILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNKLKALNGERSRLAQSFDYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 1.643e-102
Identity = 182/219 (83.11%), Postives = 200/219 (91.32%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A++VAI VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+LLLRMGQRNLVVVSSP+ +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R+ WE+EAA+VVEDVKK+P AAT+GIVLRRRLQLMMYNNMYRIMFDRRFES++DPLFN+LKALNGER+RLAQSF+YNYGDFIPILR
Sbjct:   14 FVAILVAILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFNKLKALNGERSRLAQSFDYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 2.146e-102
Identity = 185/219 (84.47%), Postives = 195/219 (89.04%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F+A VVAI VSKLRGKR              NWLQVGDDLN R L++L+KK+GDV LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQ RFNWEDEAARVVEDVKKDP+AAT GIVLRRRLQL+MYNNMYRIMFDRRFES DDPLFN+LKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FAAAVVAIAVSKLRGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDDPLFNKLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.781e-102
Identity = 181/219 (82.65%), Postives = 197/219 (89.95%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F+A++VA  VSKLRGK+              NWLQVGDDLNHRNLSD AKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R+ WE+EAARVVEDVKK+PE+ATNGIVLRRRLQLMMYNNMYRIMFDRRFES+DDPLF +LKALNGER+RLAQ FEYNYGDFIPILR
Sbjct:   14 FAAIIVASIVSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFVKLKALNGERSRLAQGFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.221e-99
Identity = 176/219 (80.37%), Postives = 196/219 (89.50%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F+A++ AI +SKLRGK+              NWLQVGDDLNHRNL+DLAK++G++LLLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R+ WE EAA VV+DVKK+P AAT GIV+RRRLQLMMYNNM+RIMFDRRFES+DDPLF +LKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FAAIIGAILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.948e-99
Identity = 177/219 (80.82%), Postives = 193/219 (88.13%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A VVAI VSKLRGKR              NWLQVGDDLNHRNL+ LAK++GD+ LLRMGQRNLVVVSSPD AKEVLHTQGVEFGSRTRNVVFDIFTG+GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R  WE EAA VV+DV+K+P+AA +G+V+RRRLQLMMYNNMYRIMFDRRFES++DPLF RLKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FLAAVVAIVVSKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRFESEEDPLFQRLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 4.948e-99
Identity = 175/219 (79.91%), Postives = 193/219 (88.13%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A + AI +SKLRG+R              NWLQVGDDLNHRNL+DLAK++GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+RF WE EAA VV+DV+++P+AA  GIVLRRRLQLMMYNNMYRIMFDRRFES++DPLF +LKALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FIAAITAIAISKLRGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.102e-98
Identity = 176/219 (80.37%), Postives = 192/219 (87.67%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A VVAI VS LRG++              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R  WE EAA VVEDVKK+P+AA +G V+RRRLQLMMYNNMYRIMFDRRFES++DP+F RL+ALNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FLAAVVAIAVSTLRGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFEYNYGDFIPILR 232          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.880e-98
Identity = 177/219 (80.82%), Postives = 192/219 (87.67%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F A +VAIT+SKLRGK+              NWLQVGDDLN RNL D AKK+GD+ +LRMGQRNLVVVSSP+ AK+VLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQ+RF WEDEAARVVEDVK +PEAATNGIVLR RLQL+MYNNMYRIMFDRRFES DDPLF +LKALNGER+RLAQSFEY++GDFIPILR
Sbjct:   15 FIATIVAITISKLRGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVKANPEAATNGIVLRNRLQLLMYNNMYRIMFDRRFESVDDPLFLKLKALNGERSRLAQSFEYHFGDFIPILR 233          
BLAST of CF832707 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 5.470e-98
Identity = 173/219 (79.00%), Postives = 194/219 (88.58%), Query Frame = 3
Query:   54 FSAVVVAITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQHRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERNRLAQSFEYNYGDFIPILR 710
            F+A++ +I +SKLRGKR              NWLQVGDDLNHRNL+DLAKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ+R  WE EAA VV+DVKK+P+AAT G+V+R+RLQLMMYNNM+RIMFDRRFES+DDPLF +LK LNGER+RLAQSFEYNYGDFIPILR
Sbjct:   14 FAAIIASIFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLFVKLKMLNGERSRLAQSFEYNYGDFIPILR 232          
The following BLAST results are available for this feature:
BLAST of CF832707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
TCMO_POPKI1.756e-10484.93Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_POPTM1.643e-10283.11Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_RUTGR2.146e-10284.47Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_CATRO4.781e-10282.65Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_HELTU2.221e-9980.37Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_PHAAU4.948e-9980.82Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_GLYEC4.948e-9979.91Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_SOYBN1.102e-9880.37Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PETCR1.880e-9880.82Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_ZINEL5.470e-9879.00Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832707 ID=CF832707; Name=CF832707; organism=Citrus sinensis; type=EST; length=710bp
CGTTAATCGTACCTATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCC
CTCTTCTCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCGGAAA
GCGCTTCAAGCTCCCCCCCGGCCCCCTCCCCGTCCCCGTATTCGGCAACT
GGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTTAGCC
AAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAACCTCGT
CGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTTCTGCACACGCAGGGAG
TGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGG
AAGGGCCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCGGAAGAT
GCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTCAGCAAC
ATCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTCGTTGAGGATGTTAAG
AAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGCTGCA
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGGGAG
AGGAATCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTTTATTCC
CATTTTGAGA
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