CF832712

Overview
NameCF832712
Unique NameCF832712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:347..1131. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832712 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.885e-13
Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = -1
Query:  205 ILALTTKPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLVLLP-NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGV-SNVDGVQRLVVVD 783
            +LA    P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P N    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  + FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CF832712 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.442e-12
Identity = 55/207 (26.57%), Postives = 100/207 (48.31%), Query Frame = -1
Query:  196 LILALTTKPQ---LGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDN-SIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGVSNVDGVQRLVVVDDND 786
            L+ A T+K     +  + + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  ++    D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  + FK+EK                 YK   C + V  SC TLC D+G  + D  Q  + + DN+
Sbjct:   10 LLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPS-VCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of CF832712 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.606e-11
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = -1
Query:  334 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKD-KRGKNLVLLP---NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNLFKLEKVSASIFDMKI 750
            AS   P+LD+ G++V +   YY+VSA+WG   GG   A      +C TDVI +SP D   G  + + P   +  S +V  ST    +F+ +++ + C  +  W + +D+AS G+ F+  GE      N FK+E V A++   K+
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVI-VSPNDLDNGDPITITPATADPESTVVMASTYQTFRFN-IATNKLCVNNVNWGIQHDSAS-GQYFLKAGEFVSDNSNQFKIELVDANLNSYKL 177          
The following BLAST results are available for this feature:
BLAST of CF832712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU2.885e-1331.07Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC2.442e-1226.5721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPOR1_IPOBA4.606e-1133.33Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02E21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832712 ID=CF832712; Name=CF832712; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTAACAGCGAAAGCATCATAGGGCTGTTTTATTCATGC
TTAACCATACAGATTAAAGAGTACTAGCCTGGTCCATTATTTAGAATAAT
ACAGCCTGCTGGCTTATTCATTACAGAGACGGAAATAACATAGATCTTCC
ACTATCAGCTGGAAATAACACAACAGGCAAAGGCAGATTTGGCTGATCAT
TATCATCAACCACAACTAGACGTTGGACGCCATCCACATTAGAAACGCCA
ACGTCTTTGCAGAGTGTATCACAAGAACCATTAACAGGTGTTGAACAATG
AACAATTTTGTATAGACAGGGAATGTCTAGTGCTATTTTCATATCAAATA
TTGATGCACTAACTTTCTCAAGTTTAAACAAATTTTGACACGTTTTACCT
TCACCGATTGTTATAAACTGCTTTCCTAATGAAGCGTTATCGTTGTCAAC
TTTCCACAACGAATCTTTGTTACACTGCTGAAGAGAAGAAACTCTTGAGA
ATTTCAATTTAATATTAGTGGACTCCCGGACAATTATGGAATTGTCATTC
GGAAGTAAAACTAAATTCTTTCCCCTTTTGTCCTTAGGACTTAATTGGAT
AACATCCGTTGGACACTGTCCATTTTTGCCTTTGTCCGCGCTAATTCCAC
CGCCGGTTTTAACTCCCCAGAGTGCTGAGACAAGATAATACCTGTGGCTG
GAGTCCACCTGGTTGCCATAGACATCTAAGATAGGTTCAGATTCTGAGGC
GCCCAACTGAGGTTTTGTGGTCAAAGCAAGTATAAG
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