CF832746

Overview
NameCF832746
Unique NameCF832746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832746 vs. ExPASy Swiss-Prot
Match: GALT_ARATH (Probable galactose-1-phosphate uridyl transferase OS=Arabidopsis thaliana GN=At5g18200 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.148e-84
Identity = 141/227 (62.11%), Postives = 179/227 (78.85%), Query Frame = -3
Query:  118 FGFHDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNXXXXXXXXXXXXXSQLLALPVIPPPIFARINSTKEYFDQTGKCCFCEVQPKDLQIDVTTHFISIVPFGATFPFEIWIIPRNHFFHFHELDNEKAVDFGGLLKLTLRKIFVQLNNPPFNFMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVFFEDAAKVMRE 798
            FGFHDVVIESPVHS+QL D++P  +G++L+A KKRI QI ++D I Y+QVFKN             SQ++ALPV+PP + +R++ TK+YF++TGKCC CE + K   ID ++HF+S+ PF AT+PFEIWIIP++H  HFH LD+ KAVD GGLLKL L+KI  QLN+PP+N+MI T+PL+  ++QL Y HWFLQIVPQL+GVGGFEIGTGCYINPVF ED AKVMRE
Sbjct:  121 FGFHDVVIESPVHSIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMRE 347          
BLAST of CF832746 vs. ExPASy Swiss-Prot
Match: GAL7_THEMA (Galactose-1-phosphate uridylyltransferase OS=Thermotoga maritima GN=galT PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21
Identity = 61/237 (25.74%), Postives = 117/237 (49.37%), Query Frame = -3
Query:  115 GFHDVVIESPVHSVQLQDLEPREVGEVLLACKKRIEQIKEYDLIKYVQVFKNXXXXXXXXXXXXXSQLLALPVIPPPIFARINSTKEYFDQTGKCCFCEV---QPKDLQIDVTTHFISIVPFGATFPFEIWIIPRNHFFHFHELDNEKAVDFGGLLKLTLRKIFVQLNNP-PFNFMIQTAPLQAIDTQLAYIHWFLQIVP------QLAGVGGFEIGTGCYINPVFFEDAAKVMRES 795
            G  +VV+ +  H+  L  +  +++ +++     R   + ++D +KY+ +F+N              Q+ A P +P  I  +I + ++++++  KC  CEV   + ++ ++  T HF+++VPF A FP+E+ I P+ H     E   E+  +F  +LK+   K     +   P+  M   AP    D    + H+ ++  P      +L  +   E GT  +INPV  E+AA+ +RE+
Sbjct:   79 GVCEVVVYTSDHNTALPGMPLKQIEKLVEMWVDRTRDLSQHDFVKYIFIFENRGKEVGASLPHPHGQIYAFPFLPKRIEVKIGAMRKWYEEKRKCPICEVLESEGEERKVYETEHFLALVPFYARFPYEVHIYPKRHVSTLLEFSKEEKKEFAKVLKVVTAKYDKLFDQEFPYMMMFFQAPFNEEDVS-HFFHFHVEFNPPKRDRDKLKWMASVETGTWAFINPVVPEEAARQLRET 314          
The following BLAST results are available for this feature:
BLAST of CF832746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GALT_ARATH7.148e-8462.11Probable galactose-1-phosphate uridyl transferase ... [more]
GAL7_THEMA1.733e-2125.74Galactose-1-phosphate uridylyltransferase OS=Therm... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02F23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02F23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832746 ID=CF832746; Name=CF832746; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTTTTTTTTTTTTAAAAAAAAAAATACTTGCCATTCCACTTTGAAA
CTATGAATTTTTTTATTTCCCGGAATTAATATAAAATTTGTTCATGCCAT
ACTTTGGAACATTAACTTTCCCGCATAACTTTAGCAGCATCCTCAAAAAA
AACAGGATTTATGTAACAACCTGTACCGATTTCAAAACCCCCAACACCGG
CTAATTGAGGTACAATTTGTAAAAACCAGTGTATATAGGCTAACTGAGTA
TCAATGGCTTGAAGGGGAGCTGTCTGGATCATGAAATTGAAAGGCGGGTT
ATTCAATTGCACAAAAATCTTTCTAAGCGTGAGTTTCAGCAAACCCCCGA
AATCAACAGCCTTCTCGTTATCTAGCTCATGGAAATGAAAAAAGTGATTT
CGGGGAATAATCCATATCTCAAAAGGAAATGTGGCACCAAAAGGAACAAT
GGAAATAAAATGTGTAGTAACATCTATTTGAAGGTCCTTGGGTTGAACTT
CACAAAAACAGCATTTTCCAGTCTGATCGAAATATTCCTTCGTACTGTTA
ATTCTTGCAAAAATGGGGGGTGGAATGACTGGAAGTGCCAGTAATTGACT
GTGAGAATGACTCATTGATGCTCCTGCTGAAGCACCATGGTTCTTGAACA
CCTGTACGTATTTAATCAAATCATACTCTTTAATCTGCTCGATCCTCTTC
TTACACGCAAGCAAAACCTCCCCAACTTCTCTCGGCTCCAAATCCTGCAG
CTGAACCGAATGAACCGGGGATTCAATCACAACATCGTGAAACCCGAACC
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