CF832767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_ARATH (COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana GN=CSN8 PE=1 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 6.390e-80 Identity = 140/197 (71.07%), Postives = 169/197 (85.79%), Query Frame = 1 Query: 46 MDLSPLTDALASKSYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPNKLQRLTKYVFHLEH 636 MDLSP+ +ALA+KS++KIADICD LML+VA+EGI + D+WPY IHLLGY+YV+D +SARFLWK IP+ IK+ + EVVAAW IGQ LWT DYAGVY+AIRG+DWSQEA+ +VAAFS+LYTKRMFQLLLSAYSTI+ D ALFLGM EDDA YV + GWT+D AS+M +VKKQ + EQK+D +KLQRLT+YVFHLEH Sbjct: 1 MDLSPVKEALAAKSFDKIADICDTLMLQVASEGIEYHDDWPYAIHLLGYFYVDDCDSARFLWKRIPTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMVAAFSDLYTKRMFQLLLSAYSTITIHDLALFLGMTEDDATTYVVENGWTVDAASQMASVKKQAVKREQKVDSSKLQRLTEYVFHLEH 197
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_XENLA (COP9 signalosome complex subunit 8 OS=Xenopus laevis GN=csn8 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.351e-29 Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 46 MDLSPLTDALASKSYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPN--KLQRLTKYVFHLEH 636 M LS A S S++K+ + C++ L+ A GIA + ++ L Y ND+N+AR+LWK IPS IK S +E+ W++GQ +W RD+ G+Y +I + WS+ Q ++ A + +R F L+ AY++IS D A F+G+ ++A V +QGW D A+ M+ KK P L PN +L RLT YV LE+ Sbjct: 1 MKLSESVMAQNSVSFQKLQEQCEEQELE-APGGIASPQVYNQLLAL--YLLHNDLNNARYLWKRIPSAIKSSHSELGGIWEVGQKIWQRDFPGIYTSISAYQWSENIQQIMEAVRDATQQRAFGLVSQAYTSISADDFAAFVGLPVEEAVKGVLEQGWQADSATGMVMPKK-PDSAPLSLIPNEQQLARLTDYVAFLEN 195
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_XENTR (COP9 signalosome complex subunit 8 OS=Xenopus tropicalis GN=csn8 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 69/186 (37.10%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 85 SYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPN--KLQRLTKYVFHLEH 636 S++++ + C++ L+ A GIA + ++ L Y ND+N+AR+LWK IP IK + +E+ W++GQ +W RD+ G+Y +I WS+ Q ++ A + +R F L+ AY++IS D A F+G++ ++A V +QGW D A+RM+ KK P L PN +L RLT YV LE+ Sbjct: 12 SFQRLQEQCEEQELE-APGGIANPQVYSQLLAL--YLLHNDMNNARYLWKRIPPAIKSAHSELGGIWEVGQKIWQRDFPGIYTSISACQWSEAIQPVMEAVRDATRRRAFGLVSQAYTSISADDFAAFVGLSVEEAVKGVIEQGWQADLATRMVMPKK-PDSAPLSLIPNEQQLARLTDYVAFLEN 193
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_DANRE (COP9 signalosome complex subunit 8 OS=Danio rerio GN=cops8 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26 Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 1 Query: 181 LLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQPLVTEQKLDPN--KLQRLTKYVFHLEH 636 L+ Y ND+N+AR+LWK IP IK + E+ A W +GQ +W RD+ G+Y AI + WS+ ++ A E +R + L+ AY++IS +D A F+G + ++A V GW DP +RM+ +K P L PN +L RLT YV LE+ Sbjct: 39 LVLYLLHNDMNNARYLWKRIPQAIKTANPEMAAIWAVGQRIWQRDFPGIYSAIAAYQWSESILPVMEALRESTRRRAYGLVAQAYTSISAEDFAAFVGYSVEEAVKGVVSHGWQADPNTRMIMPQK-PDPPPVSLVPNEQQLARLTDYVAFLEN 191
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_RAT (COP9 signalosome complex subunit 8 OS=Rattus norvegicus GN=Cops8 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 85 SYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ-------------PLVTEQKLDP----NKLQRLTKYVFHLEH 636 S+ K+ D C++ L+ A GIA + ++ L Y ND+N+AR+LWK IP IK + +E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K PL + P +L RLT YV LE+ Sbjct: 12 SFRKLLDQCENQELE-APGGIATPPVYGQLLAL--YLLQNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPAPGALDVSLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_MOUSE (COP9 signalosome complex subunit 8 OS=Mus musculus GN=Cops8 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 85 SYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ-------------PLVTEQKLDP----NKLQRLTKYVFHLEH 636 S+ K+ D C++ L+ A GIA + ++ L Y ND+N+AR+LWK IP IK + +E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++I D A F+G+ ++A V +QGW D +RM+ +K PL + P +L RLT YV LE+ Sbjct: 12 SFRKLLDQCENQELE-APGGIATPPVYGQLLAL--YLLQNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDVSLNRFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_PONAB (COP9 signalosome complex subunit 8 OS=Pongo abelii GN=COPS8 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 66/201 (32.84%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 85 SYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ-------------PLVTEQKLDP----NKLQRLTKYVFHLEH 636 S++K+ D C++ L+ A GIA + ++ L Y ND+N+AR+LWK IP IK + +E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K PL + P +L RLT YV LE+ Sbjct: 12 SFKKLLDQCENQELE-APGGIATPPVYGQLLAL--YLLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSIVADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_HUMAN (COP9 signalosome complex subunit 8 OS=Homo sapiens GN=COPS8 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 66/201 (32.84%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 85 SYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRMLTVKKQ-------------PLVTEQKLDP----NKLQRLTKYVFHLEH 636 S++K+ D C++ L+ A GIA + ++ L Y ND+N+AR+LWK IP IK + +E+ W +GQ +W RD+ G+Y I WS+ Q ++ A + +R F L+ AY++I D A F+G+ ++A + +QGW D +RM+ +K PL + P +L RLT YV LE+ Sbjct: 12 SFKKLLDQCENQELE-APGGIATPPVYGQLLAL--YLLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 209
BLAST of CF832767 vs. ExPASy Swiss-Prot
Match: CSN8_DICDI (COP9 signalosome complex subunit 8 OS=Dictyostelium discoideum GN=csn8 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13 Identity = 49/197 (24.87%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 46 MDLSPLTDALASKSYEKIADICDDLMLKVAAEGIAFQDEWPYVIHLLGYYYVNDINSARFLWKSIPSTIKDSRAEVVAAWKIGQHLWTRDYAGVYDAIRGFDWSQEAQALVAAFSELYTKRMFQLLLSAYSTISTQDTALFLGMNEDDAAYYVQQQGWTLDPASRML-TVKKQPLVTEQKLDPNKLQRLTKYVFHLE 633 M + + + ++SK+++ I D C ++ ++ I + Y ++LL Y ND+ +A+ LWK IP+ K S ++ + I + + + Y ++ + + + E + +R F+L+ +AYS+I+ D + +LG++ +D + + W D AS L V Q +E +++ LT YV LE Sbjct: 1 MAFTEIANLISSKNFKAILDYCQ--RQEIESKNIDLIKSY-YGVYLLSYLINNDLINAKHLWKRIPNDFKQSNQQLKNIYTIIKSISQTNPTITYTSL-SINIGDDYTPFITTLKENFQQRTFELISNAYSSITVNDCSSYLGISPEDTIKFTTSKCWEHDKASNTLKPVPIQKQSSELPTGNQQIRSLTSYVLFLE 193 The following BLAST results are available for this feature:
BLAST of CF832767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832767 ID=CF832767; Name=CF832767; organism=Citrus sinensis; type=EST; length=691bpback to top |