CF832773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 3 Query: 138 QNNKKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 395 Q KKWSKGKQ EKVNNMVLFD++TYDKLLSEAPKYKLITPS+LSDRLRI+GSLARKAIR+LMARG IRMVSAHASQQIYTRATNT Sbjct: 23 QKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 3 Query: 138 QNNKKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 395 Q KKWSKGKQ EKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDR+RINGSLAR+AIRELMA+GLIRMVSAH+SQQIYTRATNT Sbjct: 23 QKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.995e-37 Identity = 75/86 (87.21%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 138 QNNKKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 395 Q KKWSKGKQ EKVNNMVLFDQATYDKLL+EAPK+KLITPSILSDR+RINGSLAR+AIRELMA+G+IRMV+AH+SQQIYTRATNT Sbjct: 23 QKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.162e-36 Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 3 Query: 138 QNNKKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATN 392 Q KKWSKGKQ EKVNNMVLFDQATYDKLLSEAPK+KLITPSILSDRLRINGSLAR+AIRELMA+G IRMVSAH+SQQIYTRAT+ Sbjct: 23 QKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 7.052e-34 Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 3 Query: 138 QNNKKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 389 + KKWSKGKQ EKVNNMVLFDQATYDKL+SEAPK+KLITPSILSDRLRINGSLARKAIR+LM +G IRMVS H+SQQI TRAT Sbjct: 22 KQKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 105
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS25_AMACR (40S ribosomal protein S25 OS=Amaranthus cruentus GN=RPS25 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.552e-28 Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 138 QNNKKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATN 392 Q KKWSKGKQ EKVNN+VLFD AT+DKLLSEA K K++T + LS+R RINGSLAR+AIREL++RG I+MV H+S QIYTR+TN Sbjct: 22 QKKKKWSKGKQKEKVNNLVLFDNATFDKLLSEAGKQKVVTAATLSERFRINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS25_BRABE (40S ribosomal protein S25 OS=Branchiostoma belcheri GN=RPS25 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.068e-26 Identity = 53/81 (65.43%), Postives = 70/81 (86.42%), Query Frame = 3 Query: 147 KKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 389 KKWSKGK +K+NN+VLFD+ATYDKL E P YKLITPS++S+RL+I GSLAR A++EL ++G+I++VS H++Q IYTRAT Sbjct: 29 KKWSKGKVRDKLNNLVLFDKATYDKLYKEVPSYKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRAT 109
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS25_SHEEP (40S ribosomal protein S25 OS=Ovis aries GN=RPS25 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.508e-25 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 3 Query: 147 KKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 389 KKWSKGK +K+NN+VLFD+ATYDKL E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T Sbjct: 33 KKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS25_RAT (40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.508e-25 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 3 Query: 147 KKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 389 KKWSKGK +K+NN+VLFD+ATYDKL E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T Sbjct: 33 KKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
BLAST of CF832773 vs. ExPASy Swiss-Prot
Match: RS25_MOUSE (40S ribosomal protein S25 OS=Mus musculus GN=Rps25 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.508e-25 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 3 Query: 147 KKWSKGKQNEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 389 KKWSKGK +K+NN+VLFD+ATYDKL E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T Sbjct: 33 KKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113 The following BLAST results are available for this feature:
BLAST of CF832773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832773 ID=CF832773; Name=CF832773; organism=Citrus sinensis; type=EST; length=541bpback to top |