CF832821

Overview
NameCF832821
Unique NameCF832821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1735 contig Csv1_Contig1735:308..673. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832821 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 1
Query:   10 DSTD--VRESTDLNL-----------I*PVWTVGNYNASLGKWFLPTGGIVGHPGAKTLLNWFKLKKDSDSIYNLVHCPSVCDSCVKLCNKV 246
            DS D  VR STD+N+              VW + NY+ S GKW++ T G+ G PG  TL +WFK++K     Y    CPSVCDSC  LC+ +
Sbjct:   92 DSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDI 183          
BLAST of CF832821 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.556e-11
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 1
Query:   22 VRESTDLNL-----------I*PVWTVGNYNASLGKWFLPTGGIVGHPGAKTLLNWFKLKKDSDS-IYNLVHCPSVCDSCVKLCNKVDIF 255
            VR STDLN+              VW +  Y+ S G++F+  GG+ G+PG +T+ +WFK+++   S  Y LV CP+VC SC   C  V I+
Sbjct:  105 VRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194          
The following BLAST results are available for this feature:
BLAST of CF832821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC9.386e-1442.3921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.556e-1138.89Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02H22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832821 ID=CF832821; Name=CF832821; organism=Citrus sinensis; type=EST; length=366bp
CCGCTTGACGATTCTACAGATGTCCGGGAATCCACTGATCTCAACTTGAT
ATAACCAGTATGGACAGTTGGTAACTATAATGCTTCATTAGGAAAATGGT
TTCTACCAACCGGAGGAATCGTCGGCCACCCAGGAGCTAAAACGTTGCTA
AATTGGTTTAAGCTTAAGAAAGATAGTGACAGCATATACAATCTTGTTCA
TTGTCCATCTGTTTGCGATTCTTGCGTTAAACTCTGTAACAAAGTCGACA
TCTTTTATGTGGACGGCGTTCGACGTCTGGTTCTGGTTCGTGATGATGAT
CAGCCTCTCCGGTTGGTGTTATTTCCAGCTCCTAATCCTTCAAGATCCTC
TATGTAATGAATGACC
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