CF832838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.857e-49 Identity = 100/152 (65.79%), Postives = 116/152 (76.32%), Query Frame = 3 Query: 81 MSTVRLPTSCLFQAAPRSKKFS--LVKSPASLGSTRSVSKAFGLKCSS-FKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MST TSC R+ + S VKSP+SL V+K LK S SAMAVYKVKL+GP GEE+EFDAPDDAYI+D+AE AG+ELPYSCRAGACSTCAG++ SGSVDQSDGSFLDD Q E+G+VLTCV+YP SDCVI+THKE +LY Sbjct: 1 MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY 152
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.413e-48 Identity = 95/155 (61.29%), Postives = 129/155 (83.23%), Query Frame = 3 Query: 81 MSTVRLPTSCLFQAAPRSKKFS-LVKSPA---SLGSTRSVSKAFGLKCS--SFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 M+TVR+ ++ + +A RS+ + L+ + + S+GST+ VS++FGLKCS S A+ AVYKVKL+GP+G+E+EF+ DD YI+D+AE+AG++LPYSCRAGACSTCAGQ+VSG+VDQSDGSFL+D +EKG+VLTCVAYP SDCVI+THKE+EL+ Sbjct: 1 MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.155e-40 Identity = 74/97 (76.29%), Postives = 87/97 (89.69%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 AVYKVKLIGP GEENEF+ DD +I+D+AE+AG++LPYSCRAGACSTCAGQ+V G VDQS+GSFL+D EKGFVLTCVAYP SDCVI+THKE+EL+ Sbjct: 2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.566e-39 Identity = 80/138 (57.97%), Postives = 106/138 (76.81%), Query Frame = 3 Query: 120 AAPRSKKFSLVKSPASLGSTRSVSKAFGLKCSS-FKASAMAV-YKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 AAP + S G R ++A G + SS F ASA AV +KVKL+GP+G E+EF+APDD YI+++AE AG+ELP+SCRAG+CSTCAG+M +G VDQS+GSFLDD QM +G++LTC++YP +DCVI+THKE +LY Sbjct: 24 AAPAANTLSFA------GHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDLY 155
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.566e-39 Identity = 73/97 (75.26%), Postives = 86/97 (88.66%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 AVYKVKLIGP+G+ENEFD PDD YI+D+AE+AG++LPYSCRAGACSTCAG++ G VDQSDGSFL+D EKG+VLTCVAYP SD VI+THKE EL+ Sbjct: 2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.265e-37 Identity = 81/145 (55.86%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 102 TSCLFQAAPRSKKFSLVKSPASLGSTRSVSKAF-GLKCSSFK---ASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 T L+ A + P S+ +T++ S F GLK S + A AMA YKVKL+ P+G + EF+ P D YI+D AE+ G++LPYSCRAG+CS+CAG++V G VDQSDGSFLDD+Q+E GFVLTCVAYPTSD VI THKE +L Sbjct: 4 TPALYGTAVSTSFLRTQPMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLVTPDGTQ-EFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDVVIETHKEEDL 147
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.372e-35 Identity = 76/144 (52.78%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 102 TSCLFQAAPRSKKFSLVKSPASLGSTRSVSKA-FGLKCSSFKA--SAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 T+ A S F+ P + +V +A FGLK S+ + +AMA YKV L+ P G++ E + PDD YI+D+AE+AG++LPYSCRAG+CS+CAG++ SGSV+Q DGSFLDD Q+++G+VLTCVAYPT D I THKE EL Sbjct: 4 TTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.056e-35 Identity = 74/129 (57.36%), Postives = 98/129 (75.97%), Query Frame = 3 Query: 153 KSPASLGST--RSVSKAFGLKCSSFKA---SAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 ++P SL S + FGLK S+ + +AMA YKVK I P GE+ E + +D Y++D+AE+AG++LPYSCRAG+CS+CAG++VSGS+DQSD SFLDD+QM +G+VLTCVAYPTSD VI THKE + Sbjct: 20 QTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAI 147
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 3.992e-35 Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 3 Query: 234 MAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA Y VKLI P+GE N + DD YI+D+AE+AG++LPYSCRAGACSTCAG++ +GSVDQSD SFLDD Q+E G+VLTCVAYPTSDC I THKE +LY Sbjct: 1 MASYTVKLITPDGE-NSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDLY 97
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 8.892e-35 Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = 3 Query: 234 MAVYKVKLIGP-NGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKV LI G + PDD YI+D+AE+AG++LPYSCRAGACSTCAG+++SG+VDQSD SFLDD Q+E G+VLTCVAYPTSDCVI THKE ELY Sbjct: 1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEELY 99 The following BLAST results are available for this feature:
BLAST of CF832838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832838 ID=CF832838; Name=CF832838; organism=Citrus sinensis; type=EST; length=629bpback to top |