CF832881

Overview
NameCF832881
Unique NameCF832881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:246..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832881 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = -3
Query:  300 IVKVSLDVNLRFPVKVFVKPCNEEPLWKVDSYDDPL----IVTGGSEGPPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLFCPRGGNKIGVSTKDGVRRLLLVGDHE 617
            +V+VS DVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC  C    + IG  + D  +  L + D+E
Sbjct:   97 VVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of CF832881 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 38/110 (34.55%), Postives = 57/110 (51.82%), Query Frame = -3
Query:  306 IVKVSLDVNLRFPVKVFVKPCN--EEPLWKVDSYDDP----LIVTGGSEGPPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLFCPRGGNKIGVSTKDGVRRLLLVGD 617
            +V+VS D+N+ F   +   PC      +W++D YD+      +  GG +G PG ET+ +WFKIE+   F   G Y +V CP+VC  C      +G+      RR L + D
Sbjct:  104 VVRVSTDLNINFSAFM---PCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
The following BLAST results are available for this feature:
BLAST of CF832881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC1.238e-1137.2721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU8.024e-1134.55Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02J19_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832881 ID=CF832881; Name=CF832881; organism=Citrus sinensis; type=EST; length=685bp
TTTTTTTTTTTTTTTTTAAGCACTGCCTATTACGTATGCATGGAGACTTA
AAAAATGTATACTTAACCTGATTAAAAATTAACAACCGCAAAAGGATCAC
AGGCGGGGTTATTTTTATTCTGTAATAAAAAAAAAAGGTTACCACCCTGG
TCTATTATTTAAAATGATACAGCTAAGTTCATTCATTACCCGGGCATTGA
TATTGCTTCACCACCTTCAAAAAACCTTGATATTGCGTTACCAGCTTGAA
ATACCCTTGAGCTTTCCTCTGATGGAAAAAACAAAACTTTCAAAGCCGGT
TCATGATCACCAACTAAAAGCAAACGTCGAACCCCATCCTTAGTTGAAAC
CCCAATTTTGTTGCCGCCCCTAGGACAAAATAAACAGACACTCGGACAAT
GGACAATATTGTATACCCCCCCATATGAAAAATTTCCAGCTTTCTCAATC
TTAAACCAATTTAGCAACGTTTCAGCTCCTGGGGGGCCCTCACTTCCGCC
GGTTACAATTAATGGATCGTCATAGCTATCAACTTTCCACAATGGTTCTT
CATTACAGGGCTTAACAAAAACTTTTACGGGGAATCTCAGGTTGACATCA
AGGGATACCTTGACAATTTTGTAATTGTCGAACGGAAGTAATCTTAAATT
ATCTCCCCTTTCGCTAGGAGAACTTAATTGGATAA
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