CF832919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 3.743e-113 Identity = 200/242 (82.64%), Postives = 212/242 (87.60%), Query Frame = 2 Query: 8 ATVPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMNLTSGE-QWPSQI 730 A PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYR +DYA +++ + + QWP I Sbjct: 9 AAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQWPGTI 250
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 1.472e-109 Identity = 196/244 (80.33%), Postives = 213/244 (87.30%), Query Frame = 2 Query: 5 TATVP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMN-LTSGEQWPSQI 730 T T P RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYR DYA A+++++ + S QWP+ I Sbjct: 3 TTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIPSDGQWPAAI 246
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 2.776e-108 Identity = 191/204 (93.63%), Postives = 196/204 (96.08%), Query Frame = 2 Query: 8 ATVPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 619 AT R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI PGHKWDVMVDLFFYR Sbjct: 2 ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRRTIAPGHKWDVMVDLFFYR 205
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 9.873e-106 Identity = 189/237 (79.75%), Postives = 200/237 (84.39%), Query Frame = 2 Query: 8 ATVPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMNLTSGEQW 718 A+ R+LS EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I GHKW+VMVDLFFYR DY + + +QW Sbjct: 2 ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDYVADYAAAPIGGADQW 238
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA2_ARATH (40S ribosomal protein Sa-2 OS=Arabidopsis thaliana GN=RPSaB PE=1 SV=2) HSP 1 Score: 377.867 bits (969), Expect = 3.176e-104 Identity = 189/246 (76.83%), Postives = 207/246 (84.15%), Query Frame = 2 Query: 2 GTATVPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMNLTSGEQW-PSQIAD 736 G AT RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT +AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI KWDVMVDLFFYR + A + + G+QW +QI+D Sbjct: 5 GVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGD------EEAEVQADYGMVGGDQWTTAQISD 244
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 4.148e-104 Identity = 183/199 (91.96%), Postives = 190/199 (95.48%), Query Frame = 2 Query: 23 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 619 QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP KWDVMVDLFFYR Sbjct: 8 QLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFYR 206
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3) HSP 1 Score: 375.941 bits (964), Expect = 1.207e-103 Identity = 182/199 (91.46%), Postives = 190/199 (95.48%), Query Frame = 2 Query: 23 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 619 QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI G KWDVMVDLFFYR Sbjct: 11 QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYR 209
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_OSTTA (40S ribosomal protein SA OS=Ostreococcus tauri GN=Ot03g03270 PE=3 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 6.653e-86 Identity = 153/199 (76.88%), Postives = 172/199 (86.43%), Query Frame = 2 Query: 23 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 619 Q+SQKEADI MMLAA HLGTKN DFQMERYV+KRR DGI+IINLGKTW+KL +AARVIVA+ENP D+I Q+ARPYGQRAVLKFA+YT A A+AGRHTPGT+TNQ F EPR+L++TDPRTD QPI E A NIPTIAFCDTDSP++ VDI IPANNK K SIGCL++LLARMVLQMRGTI P + WDVMVDLFFYR Sbjct: 4 QMSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVAVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYR 202
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_OSTLU (40S ribosomal protein SA OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_12355 PE=3 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.255e-84 Identity = 150/199 (75.38%), Postives = 171/199 (85.93%), Query Frame = 2 Query: 23 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 619 Q+SQKEADI MMLAA HLGTKN DFQMERYV+KRR DGI+IINLG+TW+KL +AAR+IVA ENP D+I Q+ARPYGQRAVLKFA+YT A AIAGRHTPGT+TNQ F EPR+LI+TDPRTD QPI E A N+PTIAFCDTDSP++ VD+ IPANNK KHSIGCL++LLARMVLQMRGT+ + WDVMVDLFFYR Sbjct: 4 QMSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGRTWDKLMLAARIIVACENPQDVICQAARPYGQRAVLKFAQYTGAKAIAGRHTPGTYTNQKDAIFAEPRVLIVTDPRTDAQPISETAYVNLPTIAFCDTDSPLKNVDVAIPANNKAKHSIGCLYYLLARMVLQMRGTVSAANPWDVMVDLFFYR 202
BLAST of CF832919 vs. ExPASy Swiss-Prot
Match: RSSA_CHLRE (40S ribosomal protein SA OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126059 PE=3 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 8.992e-83 Identity = 148/198 (74.75%), Postives = 170/198 (85.86%), Query Frame = 2 Query: 26 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 619 LSQKE DIQMMLAA+ HLGTKNC +QMERY+++RR DGIYIINL KT+EKLQMAAR+IVAIENP DI V SARPYGQRAV KFA+Y ++AGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQP+KE++ NIPTIAFCDTDSP+ +VD+ IPANNKGKHSIG L++LLARMVL+MR I + W V VDLFFYR Sbjct: 3 LSQKEQDIQMMLAAQCHLGTKNCHYQMERYMYRRRQDGIYIINLEKTYEKLQMAARIIVAIENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQIQKAFEEPRLLILTDPRTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRDQINVTNPWSVPVDLFFYR 200 The following BLAST results are available for this feature:
BLAST of CF832919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832919 ID=CF832919; Name=CF832919; organism=Citrus sinensis; type=EST; length=738bpback to top |