CF832934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832934 vs. ExPASy Swiss-Prot
Match: SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 5.902e-72 Identity = 135/178 (75.84%), Postives = 155/178 (87.08%), Query Frame = -3 Query: 232 SGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEEPVVSTKHIALAVNEELALHTRLIDDLDQHVDVTDSPLRRVQKNLAILNKRTKGGCTCMCM 765 +GP++QR ASAIRRKITILGTRLDSLQSLL K+PGKQ +SEKEMNRRKDM+ NLRSK NQ+AS LNMSNFANRDSL G ++K D +NR +G+DNQG+V FQRQ+MREQDEGLEKLEE V+STKHIALAVNEEL L TRLIDDLD VD+TDS LRRVQK+LA++NK K GC+CM M Sbjct: 35 TGPDAQRRASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSM 212
BLAST of CF832934 vs. ExPASy Swiss-Prot
Match: SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.239e-70 Identity = 133/178 (74.72%), Postives = 156/178 (87.64%), Query Frame = -3 Query: 232 SGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEEPVVSTKHIALAVNEELALHTRLIDDLDQHVDVTDSPLRRVQKNLAILNKRTKGGCTCMCM 765 +GP++QR ASAIRRKITI G +LDSLQSLL+++ GK PISEKEMNRRKDM+ NLRSK NQMA+ LNMSNFANRDSLLGP+IK D M+R TG+DNQG+VG+QRQ+MREQDEGLE+LE V+STKHIALAV+EEL L TRLIDDLD HVDVTDS LRRVQK+LA++NK + GC+CM M Sbjct: 35 TGPDAQRRASAIRRKITIFGNKLDSLQSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSM 211
BLAST of CF832934 vs. ExPASy Swiss-Prot
Match: STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = -3 Query: 232 ISEKEMNRRKDMLANLRSKVNQMASTLN--MSNFANRDSLLGPEIK-SADVMNRATG----------LDNQGLVGFQRQIMREQDEGLEKLEEPVVSTKHIALAVNEELALHTRLIDDLDQHVDVTDSPLRRVQKNLAILNKRTKGGCTCMCM 651 I EKE+ RRK+ + +L S NQ+ STL+ ++N + ++ L+G NR G DNQ L Q+ IMREQDE L+ L + ++ K++A A++ EL H ++DD++ D LR + + + + C +C+ Sbjct: 71 IQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIGTDAVSMRLRNANRRMETIKQNAGSTCMIVCI 223 The following BLAST results are available for this feature:
BLAST of CF832934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832934 ID=CF832934; Name=CF832934; organism=Citrus sinensis; type=EST; length=773bpback to top |