CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:76..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.304e-47
Identity = 99/140 (70.71%), Postives = 105/140 (75.00%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+VVIADKF  DANSKVVPA+ IP+GWMGLD+GPD IKSF  ALDTTKT+IWNGPMG FEFDKFAAG EAI                  GDSVA VEKVGL +KMSHIS GGGASLELL GK LPG LA DD
Sbjct:  261 KGVSLLLPTDVVIADKFAADANSKVVPASEIPDGWMGLDIGPDAIKSFGSALDTTKTVIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAEKMSHISTGGGASLELLEGKPLPGVLALDD 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.494e-46
Identity = 96/140 (68.57%), Postives = 105/140 (75.00%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+VV+ADKF  DA SK+VPATAIP+GWMGLDVGPD IK+F EALDTTKT+IWNGPMG FEF+KFAAG +AI                  GDSVA VEK GL DKMSHIS GGGASLELL GK LPG LA D+
Sbjct:  261 KGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDE 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.070e-44
Identity = 91/140 (65.00%), Postives = 104/140 (74.29%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLP++VVIADKF  DANSK+VPA+AIP+GWMGLD+GPD +K+F +ALDTTKT+IWNGPMG FEFDKFA G EAI                  GDSVA VEKVG+   MSHIS GGGASLELL GK LPG +A D+
Sbjct:  335 KGVSLLLPSDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNDALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKVLPGVIALDE 474          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.114e-44
Identity = 90/141 (63.83%), Postives = 105/141 (74.47%), Query Frame = -3
Query:  248 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDDG 670
            KG  LLLP++V+IADKF  DANS+ VPA+AIP+GWMGLD+GPD +K+F +ALDTT+TIIWNGPMG FEFDKFA G E+I                  GDSVA VEKVG+ D MSHIS GGGASLELL GK LPG +A D+G
Sbjct:  332 KGVSLLLPSDVIIADKFAPDANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLAELSKKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEGKELPGVVALDEG 472          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.068e-44
Identity = 91/140 (65.00%), Postives = 105/140 (75.00%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+VVIADKF  DA+SK+VPA+ IP+GWMGLD+GPD IK+F EALDTT+T+IWNGPMG FEF+KFAAG EAI                  GDSVA VEKVG+ + MSHIS GGGASLELL GK LPG LA ++
Sbjct:  288 KGVSLLLPTDVVIADKFAADADSKIVPASGIPDGWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEFEKFAAGTEAIAKKLEEISKKGATTIIGGGDSVAAVEKVGVAEAMSHISTGGGASLELLEGKQLPGVLALNE 427          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 7.671e-43
Identity = 89/140 (63.57%), Postives = 102/140 (72.86%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+VV+ADKF  DANSK+VPA+ I +GWMGLD+GPD IK+F EALDTT+T+IWNGPMG FE +KFAAG EAI                  GDSVA VEKVG+   MSHIS GGGASLELL GK LPG +A D+
Sbjct:  333 KGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSIKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDE 472          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.209e-41
Identity = 88/140 (62.86%), Postives = 98/140 (70.00%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            +G  LLLPT+VV+AD F  DANS+ V    IP+GWMGLD+GPD +K F+EAL  TKT+IWNGPMG FEFDKFAAG EAI                  GDSVA VEKVGL D+MSHIS GGGASLELL GK LPG  A DD
Sbjct:  260 RGVALLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKFFQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDD 399          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.225e-40
Identity = 87/140 (62.14%), Postives = 98/140 (70.00%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            +G  LLLPT+VV+AD F  DANS+ V    IP+GWMGLD+GPD +K F+EAL  TKT+IWNGPMG FEFDKFAAG EAI                  GDSVA VEKVGL D+MSHIS GGGASLELL GK LPG  A D+
Sbjct:  260 RGVSLLLPTDVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.728e-40
Identity = 87/140 (62.14%), Postives = 96/140 (68.57%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+V++AD F  DANS+V   TAIP+GWMGLD+GPD IK F+ AL   KT+IWNGPMG FEFDKFAAG  AI                  GDSVA VEK GL +KMSHIS GGGASLELL GK LPG  A DD
Sbjct:  261 KGVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDD 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.563e-40
Identity = 83/140 (59.29%), Postives = 99/140 (70.71%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            +G  LLLPT+VV+AD F  DAN++ V   +IP+GWMGLD+GPD +K+F+EAL   KT+IWNGPMG FEFDKFA G EAI                  GDSVA VEKVG+ ++MSHIS GGGASLELL GK LPG +A DD
Sbjct:  266 RGVALLLPTDVVVADAFAADANAQTVSVESIPDGWMGLDIGPDAVKTFQEALSDCKTVIWNGPMGVFEFDKFAVGTEAIAHSLAGLTGKGASTIIGGGDSVAAVEKVGVAEQMSHISTGGGASLELLEGKELPGIVALDD 405          
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC2.304e-4770.71Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKY_WHEAT1.494e-4668.57Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_TOBAC1.070e-4465.00Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_WHEAT3.114e-4463.83Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_SPIOL4.068e-4465.00Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_ARATH7.671e-4363.57Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGK_NOSP74.209e-4162.86Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_ANAVT1.225e-4062.14Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_SYNS32.728e-4062.14Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP43.563e-4059.29Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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