CF832984

Overview
NameCF832984
Unique NameCF832984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF832984 vs. ExPASy Swiss-Prot
Match: Y3272_ARATH (Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana GN=At3g27220 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.129e-64
Identity = 125/220 (56.82%), Postives = 154/220 (70.00%), Query Frame = 3 
Query:  210 SPARVVLSI-FVMILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSII----LPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMG 854
            S  R++L + F  +LG   +A F   SSS    S   + S W P +   I    + +   QK       TK  V   R L A F D+PAPELKWE+M++APVPRLDG ++QI NLLYVF+GYGS+DYVHSHVD++NFTDN W  RF  P+EMA+SHLG+VTDGRY+YVV+GQ GPQCRGPT+ +FVLD+ TK W + P LP PRYAPATQ+WRGRLHVMG
Sbjct:   14 SSRRLMLVLYFTSVLGIGFIAAFLCLSSS--IPSVSAVFSIWVPVNRPEIQIPIIDSKIVQKRSKQSNDTKDHV---RFLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINNLLYVFSGYGSLDYVHSHVDVFNFTDNKWCDRFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFPSLPAPRYAPATQIWRGRLHVMG 228
The following BLAST results are available for this feature:
BLAST of CF832984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3272_ARATH3.129e-6456.82Kelch repeat-containing protein At3g27220 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02M11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832984 ID=CF832984; Name=CF832984; organism=Citrus sinensis; type=EST; length=856bp
CCTTATCACGAGAGAGCAAGATACGAGAGCGACTGTCAGTGAGAAGCTTG
ACGAAAGAAGAGTCAATTCCACTTCTCTTTCTTCCTCGACGAATAAATGT
ATATCCCCATATGCGCATAATCACATGGTAGAATCTTTGATTTGATTTTG
ATACATTGTTACAGAGAGATATGGGACGCTCATTCGTCGGGAAAAACTCG
ACGACGCCGTCGCCGGCGAGAGTGGTGTTGTCGATATTTGTGATGATTCT
AGGGTTTGCATTAGTCGCTGATTTCTTCTGGGCTTCTTCTTCTAAATTCA
CTTCTTCTTACTTAAACATCGCCTCCAATTGGTCCCCTTATCATAATTCC
ATAATCTTGCCCAATAATGGCCCACAAAAGGGAGAAAATATTGGAGTTAA
AACTAAGAAGGATGTTGTTCCTAAGAGGATCTTACCAGCAACTTTTCAAG
ATTTACCTGCACCAGAATTGAAATGGGAAAAGATGAAAGCAGCACCAGTG
CCTCGTCTAGATGGGGCAGCTATACAGATTAAGAATCTTCTTTATGTGTT
TGCTGGATATGGCAGCATTGACTATGTGCATTCACACGTTGATATCTACA
ATTTTACAGATAATACATGGGGAGGAAGATTTGATATGCCAAGAGAAATG
GCCCATTCACATTTAGGAATGGTAACAGATGGTAGATATATCTATGTAGT
TACCGGACAATATGGTCCGCAATGCAGAGGTCCTACTGCCCATACATTCG
TGCTCGATACTGAGACAAAGAAATGGCAGGACCTGCCACCCTTACCTGTT
CCTCGGTATGCACCTGCAACTCAACTCTGGAGAGGTAGACTACATGTGAT
GGGTGG
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