CF833066

Overview
NameCF833066
Unique NameCF833066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1036 contig Csv1_Contig1036:78..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.418e-36
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = -2
Query:  350 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA 799
            P G LKIIDRKK+IFKLAQGEY+A EKIEN+Y + + V Q +V+GDS  + LV IV  D + +  WA  +GI+  N ++LC     + A+L DM  LG+E+ L  FE VKA+ +  + F+V+NGLLTPT K KRP+ ++YF K I ++Y+
Sbjct:  546 PEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLKAFLVGIVVPDPEVMPCWAQKKGIE-GNYQELCKSKELKKAILDDMVMLGKESGLHSFEQVKAIYIHCDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYS 694          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.536e-36
Identity = 76/152 (50.00%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+AIV  D + L +WA   G +  + E+LC +   + A+L DM  LG+++ L+ FE VK +TL  E F+++NGLLTPT K KRP+ + YF   I D+Y+ +
Sbjct:  546 PNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGFE-GSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVKGITLHPELFSIDNGLLTPTMKAKRPELRNYFRSQIDDLYSTI 696          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.843e-36
Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKIIDRKKNIFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  S+LV +V  D D L ++AA  G++  + E+LC +   R A+L D+  +G+E+ L+ FE VKA+ L  EPF++ENGLLTPT K KR +  +YF   I  +Y  +
Sbjct:  531 PNGTLKIIDRKKNIFKLAQGEYIAPEKIENIYNRSQPVLQIFVHGESLRSSLVGVVVPDTDVLPSFAAKLGVK-GSFEELCQNQVVREAILEDLQKIGKESGLKTFEQVKAIFLHPEPFSIENGLLTPTLKAKRGELSKYFRTQIDSLYEHI 681          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.843e-36
Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+A+V  D ++L +WA   G+Q  + E+LC +     A+L D+  LG+EA L+ FE VK + +  E F+++NGLLTPT K KRP+ + YF   I ++YA +
Sbjct:  547 PNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAVVVPDVESLPSWAQKRGLQ-GSFEELCRNKDINKAILDDLLKLGKEAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRPELRNYFRSQIDELYATI 697          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.740e-35
Identity = 73/152 (48.03%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+AIV  D ++L +WA   G +  + E+LC +   + A+L DM  +G+++ L+ FE V+ + L  E F+V+NGLLTPT K KRP+ + YF   I ++Y+ +
Sbjct:  546 PNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDAESLASWARKRGFE-GSFEELCRNKDVKKAILEDMVRIGKDSGLKSFEQVRGIALHPELFSVDNGLLTPTMKAKRPELRNYFRSQIDELYSTI 696          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.885e-35
Identity = 74/149 (49.66%), Postives = 103/149 (69.13%), Query Frame = -2
Query:  353 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 799
            P G LKIIDRKK+IFKLAQGEY+A EKIEN+Y + + V Q +V+GDS  + LV IV  D + + +WA  +GI+    ++LC     + A+L DM  LG+E+ L  FE VKA+ +  + F+V+NGLLTPT K KRP+ ++YF K I ++Y
Sbjct:  546 PEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLKAFLVGIVVPDPEVMPSWAQKKGIE-GTYQELCMKKELKKAILDDMVMLGKESGLHSFEQVKAIYIHCDMFSVQNGLLTPTLKAKRPELREYFKKQIEELY 693          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.885e-35
Identity = 75/152 (49.34%), Postives = 102/152 (67.11%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+AIV  D + L +WA   G Q  + E+LC +     A+L DM  LG+ A L+ FE VK + +  E F+++NGLLTPT K KRP+ + YF   I ++Y+ +
Sbjct:  547 PNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAIVVPDVEILPSWAQKRGFQ-GSFEELCRNKDINKAILEDMVKLGKNAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRPELRNYFRSQIDELYSTI 697          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4)

HSP 1 Score: 147.902 bits (372), Expect = 6.380e-35
Identity = 74/150 (49.33%), Postives = 102/150 (68.00%), Query Frame = -2
Query:  350 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA 799
            P G LKIIDRKK+IFKLAQGEY+A EKIEN+Y + + V Q +V+GDS  + LV IV  D + + +WA   GI+      LC +   + A+L DM  LG+E+ L  FE VKA+ +  + F+V+NGLLTPT K KRP+ ++YF K I ++Y+
Sbjct:  546 PAGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSQPVAQIYVHGDSLKAFLVGIVVPDPEVMPSWAQKRGIE-GTYADLCTNKDLKKAILEDMVRLGKESGLHSFEQVKAIHIHSDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYS 694          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.380e-35
Identity = 74/152 (48.68%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKI+DRKKNIFKLAQGEYIA EKIENVY++ + V Q FV+G+S  S L+ +V  D D+L ++AA  G++  + E+LC +   + A+L D+  +G+E  L+ FE VK++ +  EPFT+ENGLLTPT K KR +  ++F   I  +Y  +
Sbjct:  531 PNGTLKIVDRKKNIFKLAQGEYIAPEKIENVYSRSRPVLQVFVHGESLRSFLIGVVVPDPDSLPSFAAKIGVK-GSFEELCKNQCVKEAILEDLQKIGKEGGLKSFEQVKSIFVHPEPFTIENGLLTPTLKAKRVELAKFFQTQIKSLYESI 681          
BLAST of CF833066 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.054e-34
Identity = 72/152 (47.37%), Postives = 105/152 (69.08%), Query Frame = -2
Query:  344 PGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 799
            P G LKIIDRKKNIFKLAQGEYIA EKIENVY++ + + Q FV+G+S  S L+ +V  D ++L ++AA  G++  + E+LC +   + A+L D+  +G+E  L+ FE VK++ +  EPF++ENGLLTPT K KR +  ++F   I  +Y  +
Sbjct:  531 PNGTLKIIDRKKNIFKLAQGEYIAPEKIENVYSRSRPILQVFVHGESLRSFLIGVVVPDPESLPSFAAKIGVK-GSFEELCQNQCVKKAILEDLQKVGKEGGLKSFEQVKSIFVHPEPFSIENGLLTPTLKAKRVELAKFFQTQIKSLYESI 681          
The following BLAST results are available for this feature:
BLAST of CF833066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ACSL6_RAT4.418e-3650.00Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norv... [more]
ACSL1_HUMAN7.536e-3650.00Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL5_HUMAN9.843e-3651.32Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapien... [more]
ACSL1_MOUSE9.843e-3649.34Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL1_CAVPO3.740e-3548.03Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL6_MOUSE4.885e-3549.66Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculu... [more]
ACSL1_RAT4.885e-3549.34Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
ACSL6_HUMAN6.380e-3549.33Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapien... [more]
ACSL5_MOUSE6.380e-3548.68Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculu... [more]
ACSL5_RAT7.054e-3447.37Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02O14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833066 ID=CF833066; Name=CF833066; organism=Citrus sinensis; type=EST; length=818bp
TTTTTTTTTTTTTTTGAACCCAGCAATAGTTTATTCTTTAAACCCTATTC
ATTAAAATATGATTCATTGTGAAAACGAAATGGTTAATACAATGTATTAC
AATCCTATGCGTATAAAAAGATACAGGCCACAAGCTCATATCAACAGAGA
GGGGCTGCTTAAATATTTGAATTTCCCTTTATTTTGGCAAAACAATTAAA
GAACAAACAAGGAATGCCTCGACACCGGTCGTTACTTATTGTGGGACATC
TGCTAAAGCTAAATCTTGAAATGCAGTCTTAATTCTACACATCTGTGATT
TTGATGGTCTTCACAATGTATTTGGTGAGGGATCAGATCTAGAAAGCTCA
GCATACATATCCGCTATGGCTTTTGCAAAGTATTGCTTTGCTTGTGGTCT
CTTTATCTTAAATGTTGGAGTGAGCAGTCCATTTTCCACTGTGAATGGCT
CGAGCACCAAAGTCACAGCTTTTACAAATTCAAAGCCTCTCAACTGAGCT
TCTCTTCCTAGGGAATCCATATCAGCCAACACAGCAGCCCTCGCTCTTGG
GTCATTGCAAAGTTGCTCTAAGTTTTCATACTGAATGCCTTCAGATGCAG
CCCATGCTTTTAAAGCATCTTGGTCCACTGAGACAATGGCTACCAAAGCT
GAATTGAAGCTGTCACCATAGACAAAGCACTGACCAACAAACTTGCACTT
GGCATATACATTCTCAATTTTCTCTGCAGCTATGTACTCTCCCTGCGCTA
ACTTAAAAATATTCTTCTTCCTATCAATAATCTTTAGACGACCACCGGGG
TATCCACATTCCTATATC
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