CF833075

Overview
NameCF833075
Unique NameCF833075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1037 contig Csv1_Contig1037:1..612. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 6.652e-48
Identity = 98/165 (59.39%), Postives = 122/165 (73.94%), Query Frame = 1
Query:  112 YPTSVSFGSLKVKAKLNDXXXXXXXXXXVVDESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQNDVD-FQVRSEWRNRWQSQLSELKRRSMNKDAGGNISWAARMRRKR 603
            YPT   F S +++++L             V +S++LSFYDLLG+ ESV+L EIKQAYKQ+ARKYHPDVSPPDRVEEYT RFIRVQEAYETLSDP  R LYDRDLSMG   +FS RR+ + D +  + +SEW+ +WQ+QLS L+RRS  KD    +SWAARMRR++
Sbjct:   38 YPTRTRFSSTRIQSRLTHDDP--------VKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKD-NNTMSWAARMRRQQ 193          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.074e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  205 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            + ++  +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.074e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  205 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            + ++  +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.185e-12
Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 1
Query:  223 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12
Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 1
Query:  223 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            +Y++LG+P + +  EI++AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    8 YYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.503e-12
Identity = 45/132 (34.09%), Postives = 64/132 (48.48%), Query Frame = 1
Query:  208 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQNDVDFQVRSEWRNRWQSQLSELKRRSMNKDAGGNISWAARMRRKR 603
            S +  +Y++LG+P + S  EIK+AY+++ RKYHPD+      EE   +F  + EAY+ LSDP  R LYD    M  H AF     QQ     ++           + E+ R   + D G     A   RR R
Sbjct:    4 STKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEE---KFKEINEAYQVLSDPEKRKLYD----MYGHAAFEGAGAQQRVETTEI---------PPIEEILREFFDFDIGSIFERATGRRRAR 119          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  226 YDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQ 468
            Y++LG+  + S  EIK+AY+++A+KYHPD++P D+  E  Q+F  + EAYE LSDP  RA YD+    G H AF     QQ
Sbjct:    7 YEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDK--EAEQKFKEINEAYEILSDPQKRAQYDQ---FG-HAAFEQGGSQQ 81          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  211 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            KE  FYD+LG+P + + VEIK+AY++ A KYHPD +P    EE  ++F     AYE LSDP  R +YD+
Sbjct:    3 KETKFYDILGVPVTATDVEIKKAYRKCALKYHPDKNPS---EEAAEKFKEASAAYEILSDPEKRDIYDQ 68          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.310e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1
Query:  223 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            +Y++LG+  + S  EI+QAYKQ+ +K+HPD +  +R +E  ++F  +QEAYE LSDP  RA+YDR
Sbjct:    6 YYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNR-KEAEEKFKEIQEAYEVLSDPEKRAMYDR 69          
BLAST of CF833075 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.919e-11
Identity = 29/70 (41.43%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  208 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 417
            +++  +Y++LG+P + +  EIK+AY+++A++YHPD +P ++  E  ++F  + EAYE LSDP  R LYD+
Sbjct:    2 AQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNK--EAEEKFKEINEAYEVLSDPEKRKLYDQ 69          
The following BLAST results are available for this feature:
BLAST of CF833075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
DNJ20_ARATH6.652e-4859.39Chaperone protein dnaJ 20, chloroplastic OS=Arabid... [more]
DNAJ_THESQ9.074e-1346.48Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA9.074e-1346.48Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_THEP11.185e-1250.77Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]
DNAJ_THENN2.021e-1249.23Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ2_AQUAE4.503e-1234.09Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
DNAJ_THETN1.003e-1146.91Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
MAS5_YEAST1.310e-1149.28Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNAJ_THEAB1.310e-1149.23Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_ANATD2.919e-1141.43Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02O19_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02O19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833075 ID=CF833075; Name=CF833075; organism=Citrus sinensis; type=EST; length=612bp
GAGATGCGTTGCAGCAGCTATGGATTGATAATTCCCGGAAGCGAATCCCG
CTTCCTGACCACCACCACTACCCCAACCACCAACAAAAAACCTGACCGGT
TTCCCCGGATTTACCCGACCAGCGTATCATTCGGGTCGTTGAAAGTGAAG
GCGAAATTAAACGACGCCGCCGGTGGTACGGCTACTGCTACTGCTGTAGT
CGACGAATCGAAGGAGCTGAGCTTCTACGATCTCTTGGGCATACCGGAGT
CCGTGAGCTTGGTGGAGATAAAGCAGGCGTATAAGCAGATGGCCCGCAAG
TACCATCCTGACGTATCGCCGCCGGATCGGGTCGAGGAATACACCCAGCG
GTTTATTCGGGTCCAGGAGGCCTATGAAACGCTGTCGGATCCCGGATTGC
GTGCTCTCTACGATCGCGACTTGTCCATGGGCCTTCACCTCGCTTTCTCC
GCCCGAAGACGCCAGCAAAACGACGTGGACTTTCAAGTAAGAAGCGAGTG
GAGGAATCGTTGGCAATCTCAGCTGTCTGAGCTGAAGAGAAGAAGCATGA
ACAAGGATGCAGGAGGAAACATTTCATGGGCAGCTCGAATGCGCAGGAAG
AGGGATGGATTA
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