CF833983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U497A_ARATH (UPF0497 membrane protein At2g36330 OS=Arabidopsis thaliana GN=At2g36330 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.897e-38 Identity = 77/108 (71.30%), Postives = 94/108 (87.04%), Query Frame = 2 Query: 440 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 IL+RS+ E + F+ LGFRL EVVL+LISFS+MAADKT+GWSGDSFDRY+EYR+CLSVNV+AFVYS FQA DLAY+L K KH+I +HLR F+F +DQ+LAYLL+SAS Sbjct: 122 ILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLSVNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSAS 229
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U49D7_ARATH (UPF0497 membrane protein At5g62820 OS=Arabidopsis thaliana GN=At5g62820 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.720e-31 Identity = 91/229 (39.74%), Postives = 119/229 (51.97%), Query Frame = 2 Query: 152 HSPLRXXXXXXXXXXXXXXXXXXXQKSPINHDDKPNSKAIVAVADKFTQSSPM---------------LEKPAEV----------KTSVMFNKAVREDGTPSVMKTEXXXXXXXXXXXXXXILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 HSPLR + SP + N K+IVA +K TQ SP+ ++ A V + V+ N VREDG + T + R++ + + LGFR+ EV+L +ISFS+MAADKTQGWSGDS+DRY+EYRYCL+VNVIAFVYS F+A D A Y+AK ++I F F MDQ+LAYLL+SAS Sbjct: 21 HSPLRFHSPLSDAGDLPESRYVSPEGSPFKIE---NPKSIVA-GNKLTQFSPLPSPIPPPPPQFPPPRRQRNARVPMNSSSDKSPSSMVVHNSWVREDGGQTT--TRKAGAPINGEESTRTTVNRARGDDLVSLTALGFRITEVILCVISFSIMAADKTQGWSGDSYDRYKEYRYCLAVNVIAFVYSAFEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYLLMSAS 243
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U49A7_ARATH (UPF0497 membrane protein At5g40300 OS=Arabidopsis thaliana GN=At5g40300 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.906e-22 Identity = 63/174 (36.21%), Postives = 93/174 (53.45%), Query Frame = 2 Query: 245 DDKPNSKAIVAVADKFTQSS-PMLEKPAEVKTSVMFNKAVREDGTPSVMKTEXXXXXXXXXXXXXXILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 + P+S + ++ D S ++ P+ KT F +G +E + SK+ + + A LGFR+I V L+SFSVM +D+ +GW+ DSF Y+E+R+CL+ NVI FVYSGF DL Y L+ R++LR +F +DQ+LAYLL SAS Sbjct: 46 ESPPDSPTLSSIPDSHGSSPHTIIPTPSVAKTETPFRVT---NGEEEKKVSESRRQLRPSFSSSSSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRFCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASAS 216
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U497F_MAIZE (UPF0497 membrane protein 15 OS=Zea mays PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.563e-16 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 440 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 IL R + A + A L R L L + +V+A+D +GW+ DS+ Y ++RY +VNV+ F+YS FQ LA + + KH+I + R FDF MDQ++AYLLIS+S Sbjct: 142 ILSRKRRAAVMQRAALLARAAAAGLCLAALAVLASDTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNKHLIPHPKRDLFDFTMDQVVAYLLISSS 249
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U4975_SORBI (UPF0497 membrane protein Sb04g002820 OS=Sorghum bicolor GN=Sb04g002820 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.548e-16 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 440 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 IL R + A + L R L L + +V+AAD +GW+ DS+ Y ++RY +VNVI F+YS FQ L + + KH+I + R FDF MDQ+L YLLIS+S Sbjct: 292 ILSRKRRAAAMQRTALLARGAAAGLCLAALAVLAADTRKGWARDSYSNYTQFRYSEAVNVIGFIYSVFQFVALVELMRRNKHLIPHPKRDLFDFTMDQVLTYLLISSS 399
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U497G_MAIZE (UPF0497 membrane protein 16 OS=Zea mays PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.013e-15 Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 440 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 IL R + A + A L R L + +V+AAD +GW+ DS+ Y ++RY +VNV+ F+YS FQ LA + + H+I + R FDF MDQ+LAYLLIS+S Sbjct: 146 ILSRKRRAAVMQRAALLARAAAAGXXLAALTVLAADTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALAELMRRNTHLIPHPKRGLFDFTMDQVLAYLLISSS 253
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U497R_ORYSJ (UPF0497 membrane protein Os02g0134500 OS=Oryza sativa subsp. japonica GN=Os02g0134500 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.577e-15 Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 440 ILKRSKFEARLMFANLGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 IL R + A L L R+ +L L + +V+AAD +G++ DS+ Y + RY +VNVI FVYS Q + LA + + KH+ FDFFMDQ+LAYLLIS+S Sbjct: 148 ILLRKRPTAVLQRTALVARVAAALLCLAALAVLAADSRKGFALDSYSNYSQLRYSEAVNVIGFVYSVLQFFVLADLMRRNKHLNPRRKGDYFDFFMDQVLAYLLISSS 255
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U497H_MAIZE (UPF0497 membrane protein 17 OS=Zea mays PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 485 LGFRLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 L RL VLSL +FSV+A+ +T GW+GD + R+ +YRY ++VNVI F YS Q+ +L + R F+DQ+LAYLL+SAS Sbjct: 225 LALRLATAVLSLAAFSVIASARTSGWAGDYYARHLQYRYAVAVNVIVFAYSVAQSLGKIRHLVSPRFTFRTMSSYYCSLFLDQVLAYLLMSAS 317
BLAST of CF833983 vs. ExPASy Swiss-Prot
Match: U4974_SORBI (UPF0497 membrane protein Sb03g029220 OS=Sorghum bicolor GN=Sb03g029220 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.875e-12 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 494 RLIEVVLSLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNVIAFVYSGFQAYDLAYYLAKGKHVIRYHLRQPFDFFMDQILAYLLISAS 763 RL VLSL +FSV+A+ +T GW+GD + + +YRY ++VNVI YS Q++ L + + R F+DQ LAYLL+SAS Sbjct: 320 RLATAVLSLAAFSVIASARTSGWAGDYYAHHLQYRYAVAVNVIVCAYSIAQSFGEIRRLISPRFIFRSMSSYYCSLFLDQALAYLLMSAS 409 The following BLAST results are available for this feature:
BLAST of CF833983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833983 ID=CF833983; Name=CF833983; organism=Citrus sinensis; type=EST; length=765bpback to top |