CF834003

Overview
NameCF834003
Unique NameCF834003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.943e-38
Identity = 73/118 (61.86%), Postives = 89/118 (75.42%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF+SVPKGDAIFMKWILHDW+D HCL++LKNC KS+PE+GKVIV E +LPE P+T+  +++  H DV+M+ H PGGKERT  EF  LA GAGF G +      N WVMEF K
Sbjct:  237 EHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.626e-35
Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLK LKNC  ++P++GKVI+ E +LP  P++S+ +K   H DV+M+ H PGGKERT  EF  LA GAGF G +   +  N +V+EF K
Sbjct:  246 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.626e-35
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = -2
Query:   47 HTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 397
            H  GDMF SVPKGDAIFMKWI HDW+D HCLK LKNC +++PE+GKVI+ E +LPE P++++ +++  H DV+M+ H PGGKERT  EF  LA GAGF G        N W+ME  K
Sbjct:  247 HVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.430e-35
Identity = 69/126 (54.76%), Postives = 91/126 (72.22%), Query Frame = -2
Query:   47 ESPNQS--KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 418
            ++P+ S  +H  GDMF SVPKGDAIFMKWI HDW+D+HC KLLKNC +++P++GKVI+ E +LPE P+TS+ +++  H DV+M+ H PGGKERT  EF  LA GAGF       +  N W+ME  K
Sbjct:  225 DAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.430e-35
Identity = 68/118 (57.63%), Postives = 83/118 (70.34%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H   DMF SVPK DAIFMKWI HDW+DEHCLK LKNC +++P +GKV+V E +LPE P+TS  +K+  H D++M+ H PGGKERT  EF  LA GAGF+G          WVMEF K
Sbjct:  242 EHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.850e-35
Identity = 68/118 (57.63%), Postives = 84/118 (71.19%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLKLLKNC  ++P +GKVI+ E +LPEVP++S+ +K   H DV+ + H PGGKERT  EF  LA  AGF G        N +++EF K
Sbjct:  222 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.850e-35
Identity = 68/118 (57.63%), Postives = 84/118 (71.19%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLKLLKNC  ++P +GKVI+ E +LPEVP++S+ +K   H DV+ + H PGGKERT  EF  LA  AGF G        N +++EF K
Sbjct:  222 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.850e-35
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF S+PK DA+FMKWI HDW+DEHCLK LKNC +++P++GKVIV E +LP  P++S+ +K   H DV+M+ H PGGKERT+ EF  LA GAGF G        N ++MEF K
Sbjct:  246 EHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.850e-35
Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLK LKNC  ++PE GKVIV E +LP  P+ S+ +K   H D +M+ H PGGKERT  EF  LA GAGF G        N +VMEF K
Sbjct:  251 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CF834003 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.303e-34
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = -2
Query:   47 KHTKGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRHEFMTLATGAGFSGMSCERAIGNFWVMEFDK 400
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLK LKNC  ++P++GKVI+ E +LP  P+TS+ +K   H DV+M+ H PGGKERT  EF  LA G+GF G+       N +V+EF K
Sbjct:  246 QHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
The following BLAST results are available for this feature:
BLAST of CF834003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
COMT1_ZINEL1.943e-3861.86Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_PRUDU2.626e-3557.63Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CATRO2.626e-3557.26Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_COFCA3.430e-3554.76Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPAN3.430e-3557.63Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
OMT2_CHRAE5.850e-3557.63Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE5.850e-3557.63Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_MEDSA5.850e-3555.93Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CLABR5.850e-3559.32Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ROSCH1.303e-3457.63Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834003 ID=CF834003; Name=CF834003; organism=Citrus sinensis; type=EST; length=584bp
TTTACCAGATTTGCTTTATTTCTAGGACGCATGGCCAAGCACTCTACTTA
TCGAATTCCATAACCCAGAAATTACCAATAGCACGTTCACAACTCATCCC
ACTAAAACCAGCGCCAGTAGCCAGGGTCATGAATTCATGCCTTGTTCTCT
CCTTTCCACCGGGACAATGAATCATCATAAGCACGTCAAAATGGGAATTT
GATTTTGATTCAATGCTTGTATTAGGAACTTCTGGAAGCATTGACTCCAC
AACGATTACCTTTCCATCTTCCGGAATGCTTTTGCAGCAATTCTTCAACA
ACTTCAAGCAATGTTCATCATTCCAATCGTGCAGTATCCACTTCATAAAA
ATGGCATCACCTTTTGGAACACTTTGGAACATATCACCTTTGGTGTGTTT
GGATTGATTTGGGCTCTCTATTTTATTTACACTGGCGATCTTGAAGAAGA
TGAAGAGTCTGGCTTGTCCCTTTGAATTAAGGGTTATTTAAACTTAGGCT
TGTTGAATTTATTAATGCCCTCTTGTTAAAGAACTGGAAAACCTTTAAAT
CAACCAAAGAAAAGCTTTTGGCTCTTGAAAAAAA
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