CF834033

Overview
NameCF834033
Unique NameCF834033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:380..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.774e-64
Identity = 111/191 (58.12%), Postives = 135/191 (70.68%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            F  QT HETTGGWP AP G YAWGYC++R+ +  +            G QYYGRGPIQ++WN NY +CG  +GVDLLNNP L+ATDPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  A RLPGYG   NII GG+ECG+G +S V  RIGF+  +C  FGI  GDNLDCY+Q P+G +L   S+
Sbjct:  126 FLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.426e-62
Identity = 109/194 (56.19%), Postives = 135/194 (69.59%), Query Frame = -1
Query:  179 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM*SS 757
            F  QT HETTGGW  AP G YAWGYC++R+ +  +           PGQ YYGRGPIQ++WN NY +CG  +GVDLLN P L+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG   NII GG+ECG+G +S V  RIGFF  +C   G+  G+NLDCY+Q P+G +L+   + +S
Sbjct:  134 FLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.426e-62
Identity = 112/192 (58.33%), Postives = 135/192 (70.31%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            FFAQT HETTGGW  AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG  +GVDLLNNP L+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W PSA D  A+RLPG+G+  NII GG+ECG+G +S V  RIGF+  +C   G+ PGDNLDC  Q  +G  L+  +M
Sbjct:  138 FFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.138e-62
Identity = 109/194 (56.19%), Postives = 134/194 (69.07%), Query Frame = -1
Query:  179 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM*SS 757
            F  QT HETTGGW  AP G YAWGYC++R+ +  +           PGQ YYGRGPIQ++WN NY +CG  +GVDLLN P L+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG   NII GG+ECG+G +S V  RIGFF  +C   G+  G+NLDCY+Q P+G +L    + +S
Sbjct:  133 FLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.218e-62
Identity = 111/192 (57.81%), Postives = 135/192 (70.31%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            FFAQT HETTGGW  AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG  +GVDLLNNP L+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W PS+ D  A+RLPG+G+  NII GG+ECG+G +S V  RIGF+  +C   G+ PGDNLDC  Q  +G  L+  +M
Sbjct:  133 FFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.054e-61
Identity = 112/194 (57.73%), Postives = 136/194 (70.10%), Query Frame = -1
Query:  188 FFAQTGHETTGG--WPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PG-QYYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            F AQT HETTGG  W  AP G YAWGYCY R+++  S         P  PG QY+GRGP+QL+WN NY +CG  +GVDLLNNP LL++DP +SFKSA WFWMT Q PKPSCH VII  W+PS++D  A R+PGYG+  NII GG+ECGKGWN+ V  RIGF+  +C   G+  G+NLDCY Q P+G  +   SM
Sbjct:  132 FLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.682e-61
Identity = 111/192 (57.81%), Postives = 133/192 (69.27%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            FFAQT HETTGGWP AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG  +GVDLLNNP L+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W PS  D  A+R+PG+G+  NII GG+ECG G +S V  RIGF+  +CG  G+ PGDNLDC  Q  +G  L+  +M
Sbjct:  127 FFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.975e-61
Identity = 107/184 (58.15%), Postives = 131/184 (71.20%), Query Frame = -1
Query:  212 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYG 757
            F  QT HETTGGWP AP G YAWGYC++++ +  S+        P  PG+ YYGRGP+QL+WN NY  CGE L V+LL NP L+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W PSA D  A RLPGYG+  N++ GG+ECGKG N  VA R+GFF  +CG  G+  G+NLDCY Q P+G
Sbjct:   60 FLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.803e-61
Identity = 108/192 (56.25%), Postives = 137/192 (71.35%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            FFAQT HETTGGW  AP G YAWGYC++R+  +  D        P  PG+ Y+GRGPIQ++ N NY  CG  +GVDLLNNP L+ATDPV+SFK+A+WFWMT Q PKPSCH+VII  WNPS+ D  A+RLPG+G+  NII GG+ECG+G ++ V  RIGF+  +C   G+ PGDNLDC  Q  +G  L+  ++
Sbjct:  137 FFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328          
BLAST of CF834033 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.803e-61
Identity = 110/192 (57.29%), Postives = 132/192 (68.75%), Query Frame = -1
Query:  188 FFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEPLGVDLLNNPALLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWNPSANDVNASRLPGYGLPPNIITGGIECGKGWNSFVATRIGFFPTFCGKFGIQPGDNLDCYTQGPYGPNLMAQSM 757
            F AQT HETTGGWP AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG  +GVDLLNNP L+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W PS  D  A+R+PG+G+  NII GG+ECG G +S V  RIGF+  +CG  G+ PG+NLDC  Q  +G  L+   M
Sbjct:  131 FLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322          
The following BLAST results are available for this feature:
BLAST of CF834033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_PEA5.774e-6458.12Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHIT_PHAVU2.426e-6256.19Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI1_TOBAC2.426e-6258.33Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI5_PHAVU4.138e-6256.19Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI2_TOBAC9.218e-6257.81Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI1_GOSHI2.054e-6157.73Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI1_SOLTU2.682e-6157.81Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_CARPA5.975e-6158.15Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIT_SOLTU7.803e-6156.25Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHIC_SOLLC7.803e-6157.29Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834033 ID=CF834033; Name=CF834033; organism=Citrus sinensis; type=EST; length=757bp
TTTTTTTTTTTTTTTTTGGAGAAGACTCATTGCCTTTTTGGTTGGATCAG
GTCTTATTTAATTTACCTACAATAAGCAGCGTAACAAACTAACAATTTAG
TTGTCCACCTACAAGGGGGACATCTAAAGTTTTTATTAAGTAGCTTTTAT
TAAGCTTATTTTACTAAAACGTTGATCATGATGATCACATAGATTGGGCC
ATCAAATTAGGGCCATAAGGGCCTTGGGTGTAGCAATCAAGATTGTCGCC
AGGCTGAATCCCAAACTTGCCACAGAAAGTGGGAAAGAACCCAATACGGG
TAGCTACAAAGCTATTCCAACCTTTGCCACATTCAATTCCACCGGTGATT
ATATTTGGGGGTAGACCGTATCCCGGAAGCCGGCTGGCGTTTACGTCATT
TGCTGATGGGTTCCATTCGTCGATAATGACTTCGTGGCACGATGGCTTTG
GTGGCTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATGATAGTACT
GGATCAGTGGCAAGAAGGGCTGGATTGTTCAACAAGTCCACCCCCAAGGG
TTCTCCGCACCTTAAGTAATTGCAATTCCAAGTGAGTTGAATTGGACCTC
GGCCATAGTATTGCCCTGGCAAGGGACATGGACAGTAAGGATAACAGTAG
TCGGACCCATGGCTAACTTGCCTAATATAGCAATATCCCCAAGCATATTC
TCCACCAGGGGCATCGGGCCATCCCCCAGTAGTTTCATGGCCAGTTTGGG
CAAAAAA
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