CF834037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: ST7R_ARATH (7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.222e-21 Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 2 Query: 2 FLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 FL YFYVIFLT+LLFDRAKRDDDRCRSKYGKYWK+YC+KV YRIIPGIY Sbjct: 384 FLAYFYVIFLTLLLFDRAKRDDDRCRSKYGKYWKLYCEKVKYRIIPGIY 432
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: DHCR7_MIMIV (Probable 7-dehydrocholesterol reductase OS=Acanthamoeba polyphaga mimivirus GN=DHCR7 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 2 Query: 2 FLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 F+PYFY +++TILL R RD+ RC KYGKYWK+Y ++VPYR IPGIY Sbjct: 399 FIPYFYCVYMTILLVTRCLRDEQRCSRKYGKYWKMYTKRVPYRFIPGIY 447
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: DHCR7_XENLA (7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.768e-12 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFY I++TILL R RD+ RC SKYGK WK+Y VPYR++PG++ Sbjct: 426 LPYFYFIYMTILLVHRCIRDEHRCSSKYGKDWKLYTSAVPYRLLPGLF 473
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: LBR_RAT (Lamin-B receptor OS=Rattus norvegicus GN=Lbr PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.940e-12 Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFYVI+ T LL R RD+ +CR KYG W+ YCQ+VPYRI P IY Sbjct: 573 LPYFYVIYFTALLIHREARDEHQCRRKYGLAWEKYCQRVPYRIFPYIY 620
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: LBR_MOUSE (Lamin-B receptor OS=Mus musculus GN=Lbr PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.145e-12 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFY+I+ T LL R RD+ +CR KYG W+ YCQ+VPYRI P IY Sbjct: 579 LPYFYIIYFTALLIHREARDEHQCRRKYGLAWEKYCQRVPYRIFPYIY 626
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: DHCR7_XENTR (7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFY ++TILL R RD+ RC SKYGK WK+Y VPYR++PG++ Sbjct: 426 LPYFYFTYMTILLVHRCIRDEHRCSSKYGKDWKLYTDAVPYRLLPGLF 473
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: LBR_PONAB (Lamin-B receptor OS=Pongo abelii GN=LBR PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFY+I+ T+LL R RD+ C+ KYG W+ YCQ+VPYRI P IY Sbjct: 568 LPYFYIIYFTMLLVHREARDEYHCKKKYGVAWEKYCQRVPYRIFPYIY 615
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: LBR_HUMAN (Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFY+I+ T+LL R RD+ C+ KYG W+ YCQ+VPYRI P IY Sbjct: 568 LPYFYIIYFTMLLVHREARDEYHCKKKYGVAWEKYCQRVPYRIFPYIY 615
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: ERG24_MOUSE (Delta(14)-sterol reductase OS=Mus musculus GN=Tm7sf2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFYV++ T LL R RD+ +C KYG+ W+ YC++VPYRIIP +Y Sbjct: 371 LPYFYVLYFTALLVHREARDEQQCLQKYGRAWQEYCKRVPYRIIPYVY 418
BLAST of CF834037 vs. ExPASy Swiss-Prot
Match: DHCR7_RAT (7-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr7 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.554e-11 Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 2 Query: 5 LPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 148 LPYFY+I++TILL R RD+ RC +KYG+ W+ Y VPYR++PGI+ Sbjct: 424 LPYFYIIYMTILLTHRCLRDEHRCANKYGRDWERYVAAVPYRLLPGIF 471 The following BLAST results are available for this feature:
BLAST of CF834037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834037 ID=CF834037; Name=CF834037; organism=Citrus sinensis; type=EST; length=281bpback to top |