CF834042

Overview
NameCF834042
Unique NameCF834042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:139..913. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.033e-103
Identity = 191/198 (96.46%), Postives = 196/198 (98.99%), Query Frame = -3
Query:  195 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 788
            GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLE++AVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDEIFPPGSSILFTQS GSLTISFSKDGSIPKDGVAVIE+NLLSEAVLESMIGKNGVSPAAKKSLAER+SALLNVTSDKMK
Sbjct:   25 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.961e-78
Identity = 147/191 (76.96%), Postives = 167/191 (87.43%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            G++K  FLGGAGERGLEI+GKF+KFTAIGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE FPPG SILFTQS  GSLTI+FSKDGS+P+ G  V+EN  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:   27 GTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.561e-78
Identity = 149/192 (77.60%), Postives = 168/192 (87.50%), Query Frame = -3
Query:  216 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 788
            GS+ + FLGGAG RGLEI+G FVKFTAIGVYLE+NAVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKD S+P+   AVIEN LLSEAVLES++GK+GVSPAAK+SLA R+S LLN
Sbjct:   25 GSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.452e-78
Identity = 149/191 (78.01%), Postives = 166/191 (86.91%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            GS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKDG IP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:   23 GSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.271e-77
Identity = 149/192 (77.60%), Postives = 166/192 (86.46%), Query Frame = -3
Query:  216 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 788
            GSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIEN LL+ +VLES+IGKNGVSPAAK+SLA R+S L N
Sbjct:   25 GSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 8.239e-77
Identity = 147/191 (76.96%), Postives = 166/191 (86.91%), Query Frame = -3
Query:  219 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 788
            GS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS +GSL I  SKDGSIP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:   23 GSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.975e-76
Identity = 144/195 (73.85%), Postives = 168/195 (86.15%), Query Frame = -3
Query:  207 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 788
            GS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLE+NAVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+ FPP +S LFTQS  GSLT+SFSKDGSIP+ G AV+EN LLSEAVLES+IGK+GVSP AK++LA R+  LLN  S
Sbjct:   26 GSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.975e-76
Identity = 146/190 (76.84%), Postives = 162/190 (85.26%), Query Frame = -3
Query:  222 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 788
            GST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:   25 GSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.975e-76
Identity = 146/190 (76.84%), Postives = 162/190 (85.26%), Query Frame = -3
Query:  222 GSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 788
            GST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:   25 GSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834042 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 8.526e-74
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = -3
Query:  222 STKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 785
            S  + FLGGAGERGL I+ KFVKFTAIG+YL++ AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF +VFKD+ FPPGSSILFT    GSL ISFSKDGSIP+   AVI+N LLSEAVLESMIG +GVSPAAK+SLA R+S L
Sbjct:   26 SANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI1.033e-10396.46Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_CAMSI1.961e-7876.96Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_PYRCO2.561e-7877.60Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI1_FRAAN7.452e-7878.01Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_GOSHI1.271e-7777.60Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_FRAAN8.239e-7776.96Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI_ELAUM6.975e-7673.85Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_VITVI6.975e-7676.84Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI6.975e-7676.84Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI2_LOTJA8.526e-7474.60Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834042 ID=CF834042; Name=CF834042; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTGGTCGGGACATCAGCATTCGTAAATTAACCCAT
AATTTGGGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAG
GAAAGGACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACA
ACTCTGCCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCAT
CTTATCACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCT
TCTTTGCTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACT
GCCTCAGAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTAT
TGAACCGTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAA
AGAGAATTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTG
AATTTTTCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTT
CCATATGGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAG
TTAATGGCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTG
ACGACGTCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTT
CCCCTTCCATTTGCCGGCGAGTAACGGCACGGCGTTCTCCTCCAAGTACA
CTCCTATCGCCGTGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTC
TCCCCTGCGCCGCCGAGGAAATGCGACTTTGTTGATCCTG
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