CF834043

Overview
NameCF834043
Unique NameCF834043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:1..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 7.146e-118
Identity = 214/222 (96.40%), Postives = 220/222 (99.10%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 734
            MNPSPSVTELQVENVTFTPS+QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLE++AVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDEIFPPGSSILFTQS GSLTISFSKDGSIPKDGVAVIE+NLLSEAVLESMIGKNGVSPAAKKSLAER+SALLNVTSDKMK
Sbjct:    1 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.995e-87
Identity = 165/216 (76.39%), Postives = 186/216 (86.11%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 713
            M+ S SVTELQVEN TF P+++PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIEN LL+ +VLES+IGKNGVSPAAK+SLA R+S L N
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.228e-86
Identity = 162/216 (75.00%), Postives = 184/216 (85.19%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 713
            M P PS+  LQVE   F PS++PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLE+NAVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKD S+P+   AVIEN LLSEAVLES++GK+GVSPAAK+SLA R+S LLN
Sbjct:    1 MAPPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.212e-86
Identity = 162/214 (75.70%), Postives = 182/214 (85.05%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            M+P PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:    1 MSPVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 9.419e-86
Identity = 159/218 (72.94%), Postives = 188/218 (86.24%), Query Frame = 3
Query:   60 LSPMNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 710
            +SP + SPSV ++Q+E+  F P+++PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE FPPG SILFTQS  GSLTI+FSKDGS+P+ G  V+EN  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:    1 MSP-SQSPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.105e-85
Identity = 161/214 (75.23%), Postives = 181/214 (84.58%), Query Frame = 3
Query:   69 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            M+  PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:    1 MSQVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.169e-84
Identity = 158/210 (75.24%), Postives = 181/210 (86.19%), Query Frame = 3
Query:   84 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 710
            SVT +Q+  ++F PS++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKDG IP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.964e-83
Identity = 156/214 (72.90%), Postives = 184/214 (85.98%), Query Frame = 3
Query:   84 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 722
            SVTE+QVE+V F P ++PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLE+NAVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+ FPP +S LFTQS  GSLT+SFSKDGSIP+ G AV+EN LLSEAVLES+IGK+GVSP AK++LA R+  LLN  S
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.663e-82
Identity = 155/210 (73.81%), Postives = 180/210 (85.71%), Query Frame = 3
Query:   84 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 710
            SVT +Q+   +F P+++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS +GSL I  SKDGSIP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CF834043 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.408e-81
Identity = 156/211 (73.93%), Postives = 177/211 (83.89%), Query Frame = 3
Query:   81 PSVTELQVENVTFTPSL-QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 707
            PSVT LQVENV F P+L +PP S  + FLGGAGERGL I+ KFVKFTAIG+YL++ AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF +VFKD+ FPPGSSILFT    GSL ISFSKDGSIP+   AVI+N LLSEAVLESMIG +GVSPAAK+SLA R+S L
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI7.146e-11896.40Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI4.995e-8776.39Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_PYRCO4.228e-8675.00Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI2_VITVI7.212e-8675.70Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI_CAMSI9.419e-8672.94Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI1_VITVI6.105e-8575.23Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI1_FRAAN5.169e-8475.24Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM1.964e-8372.90Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN1.663e-8273.81Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA1.408e-8173.93Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04M22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834043 ID=CF834043; Name=CF834043; organism=Citrus sinensis; type=EST; length=770bp
CAAAATCTCTTCCCTTCAAAAATTAAGTCTTAAACACACACTGAAATTAA
TCAACAAGGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGCA
GGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACAA
AGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGGG
AAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCGT
GCCGTTACTCGCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACGG
AATCCGTTGAGTTCTTCAGAGACGTCGTCACAGGTCCCTTTGAGAAATTC
ATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGAA
GGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACAG
ATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGAA
ATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCATT
GACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCGG
TAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGGC
AAGAATGGTGTTTCTCCTGCAGCAAAGAAGAGTTTGGCTGAAAGAATATC
AGCACTGTTGAATGTAACTAGTGATAAGATGAAATGAAGAAGTTGAAAAG
TTTGCCAAATAATAAGCGAA
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