CF834061

Overview
NameCF834061
Unique NameCF834061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834061 vs. ExPASy Swiss-Prot
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.141e-12
Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = -2 
Query:  375 GQLENKMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSVHSK 551
            GQL N + +L+NWL+TS+N+L  IQDKIKWA+ M E DKKH+ E +  +++VKKS+  K
Sbjct:  165 GQLGNMLHTLSNWLNTSENLLISIQDKIKWADNMSEMDKKHRKEAEEGVEEVKKSLSMK 223
The following BLAST results are available for this feature:
BLAST of CF834061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CSN7_ARATH2.141e-1254.24COP9 signalosome complex subunit 7 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04N12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834061 ID=CF834061; Name=CF834061; organism=Citrus sinensis; type=EST; length=555bp
TTTTTTTTTTTTTTTTCAAGATAAGGCGCTTTTTCAATGTTTGAGACCTA
TTTAACATCATGATCGTATGATAGAACACAACGCCATGACTGTAGAATAA
AACGTACACCAAATCATAAGAAATGCTCAAACCTCTAAGATGGATCATCT
ATTTTAATCCTACTATGGAGAGTTATTAATTCAGACCATTGCAAGTATGT
TAAATGCCAAAACTAACCCCCTACACAATAAGGACAATTTCTGCAATCAA
CATTAGCACTGTATGAACAGCCCCCCAAAACAAAAAAAAAAAATCCTAAA
TTCTTATCACTAACTCAAAACCATATAAGCCTACGTACAAACAAACTTCA
GAGGAAAGGACTGAATCAATTGACCTTTGAATGGACAGATTTCTTCACAT
CTTGCAAGTGACTTTTGACTTCCATCTTGTGTTTTTTGTCCTCTTCGCAC
ATTGTTTCAGCCCACTTAATCTTGTCTTGAATCACGGAAAGAACATTGTC
TGAAGTGTCCAACCAATTAGTTAAGCTCTGCATCTTGTTCTCAAGTTGGC
CGTGT
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