CF834062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 7.961e-82 Identity = 152/224 (67.86%), Postives = 183/224 (81.70%), Query Frame = 3 Query: 3 EIEHKQAPLIEQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSVHSK 674 +IE KQA +I+Q VK+AST AL LI+EATSHPSLFAFSEIL++PN+ QL+GT SVY+DLLRLFAHGTW DYK NA LP L PDQ +KLKQL+VLTLAE NKVL YD L+ EL+V+NVRELEDFLINECMY GIV+GKL+QL+RCFEV FAAGRDLR GQL NM+ +L+NWL+TS+N+L IQDKIKWA+ M E DKKH+ E + +++VKKS+ K Sbjct: 2 DIEQKQAEIIDQLVKRASTCKSE--ALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDSVYLDLLRLFAHGTWGDYKCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELEDFLINECMYAGIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISIQDKIKWADNMSEMDKKHRKEAEEGVEEVKKSLSMK 223
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7_DICDI (COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum GN=csn7 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.204e-37 Identity = 83/209 (39.71%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 30 IEQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVK 656 ++QFV A + G A+V +I +A +HPS+F F E+L +PN+ QL+ TE Y DLL +FA+G++ DYK+ LPQL P KLKQL+++ L+ + V+ Y L +++E+ NVRELED +I + +Y I+KGKL+Q + E+ F+ GRD++ QL++M+ L NW TS +L I I ++ + + +K K E +S + K Sbjct: 14 LKQFVVLAKS--SKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKETEFKNYYDLLLIFAYGSFIDYKNKKDSLPQLTPQMITKLKQLTIVFLSSTSNVIPYSVLQEQIEITNVRELEDLII-DSIYQNIIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGLITHSDKVHLQYRKEKEEFESKFEIAK 219
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7B_HUMAN (COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 77/213 (36.15%), Postives = 128/213 (60.09%), Query Frame = 3 Query: 27 LIEQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSV 665 L+EQF+ A +G AL LI + P ++ F E+L + N+ +L ++ Y+ LL LFA+GT+ DY +N LP+L Q KLK L++++LA K + Y LLK+LE+ N+RELED +I E +Y I++GKL+Q + EV F GRD+R + N++++L W D + VL I+ ++ A E + + +V++ + ++KK++ Sbjct: 11 LLEQFILLAKGTSGS--ALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTL 220
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7B_BOVIN (COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 77/213 (36.15%), Postives = 128/213 (60.09%), Query Frame = 3 Query: 27 LIEQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSV 665 L+EQF+ A +G AL LI + P ++ F E+L + N+ +L ++ Y+ LL LFA+GT+ DY +N LP+L Q KLK L++++LA K + Y LLK+LE+ N+RELED +I E +Y I++GKL+Q + EV F GRD+R + N++++L W D + VL I+ ++ A E + + +V++ + ++KK++ Sbjct: 11 LLEQFILLAKGTSGS--ALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHSRTQQQVEAEVTNIKKTL 220
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7B_MOUSE (COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33 Identity = 77/213 (36.15%), Postives = 128/213 (60.09%), Query Frame = 3 Query: 27 LIEQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSV 665 L+EQF+ A +G AL LI + P ++ F E+L + N+ +L ++ Y+ LL LFA+GT+ DY +N LP+L Q KLK L++++LA K + Y LLK+LE+ N+RELED +I E +Y I++GKL+Q + EV F GRD+R + N++++L W D + VL I+ ++ A E + + +V++ + ++KK++ Sbjct: 11 LLEQFILLAKGTSGS--ALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHHRTQQQVEAEVSNIKKTL 220
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7_DROME (COP9 signalosome complex subunit 7 OS=Drosophila melanogaster GN=CSN7 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 75/218 (34.40%), Postives = 129/218 (59.17%), Query Frame = 3 Query: 33 EQFVKQASTL--NGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSVHSKVN 680 E F+++ L + G AL+ +I +A P++F F E+L+ P++LQL+ S + + L LFA+GT+ +Y++ +L P KL+ L++++LA K + Y LL ELE+ NVR LED +I E +Y I+ GKL Q R EV +A GRD+ G ++++L W+++ D+V + I+ +IK+A + +K V+ L ++KK + S+ + Sbjct: 17 ETFLEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEYRAQPEKFIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLEDIII-EAIYADIIHGKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQIKYANAEKSKRLINKERVEQDLINLKKVLKSQTS 233
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7A_MOUSE (COP9 signalosome complex subunit 7a OS=Mus musculus GN=Cops7a PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28 Identity = 73/211 (34.60%), Postives = 123/211 (58.29%), Query Frame = 3 Query: 33 EQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSV 665 EQF+ A + G AL LI + P ++ F E+L +PN+ +L ++ + LL +FA+GT+ DY + A +LP L Q KL+ LSV+TLA K + Y LL+ L + NVR+LED +I E +Y +++G L+Q + EV ++ GRD++ L + Q+L W + VLS I++++ A E+ K +++S + ++KK++ Sbjct: 13 EQFLLLAKSAKGA--ALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVI-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTI 220
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7A_PONAB (COP9 signalosome complex subunit 7a OS=Pongo abelii GN=COPS7A PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 72/211 (34.12%), Postives = 123/211 (58.29%), Query Frame = 3 Query: 33 EQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSV 665 EQF+ A + G AL LI + P ++ F E+L +PN+ +L ++ + LL +FA+GT+ DY + A +LP L Q KL+ LSV+TLA K + Y LL+ L + NVR+LED +I E +Y +++G L+Q + EV ++ GRD++ L + ++L W + VLS I++++ A E+ K +++S + ++KK++ Sbjct: 13 EQFLLLAKSAKGA--ALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVI-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTI 220
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7A_HUMAN (COP9 signalosome complex subunit 7a OS=Homo sapiens GN=COPS7A PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 72/211 (34.12%), Postives = 123/211 (58.29%), Query Frame = 3 Query: 33 EQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGTESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAEMNKVLSYDQLLKELEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKIKWAETMCEEDKKHKMEVKSHLQDVKKSV 665 EQF+ A + G AL LI + P ++ F E+L +PN+ +L ++ + LL +FA+GT+ DY + A +LP L Q KL+ LSV+TLA K + Y LL+ L + NVR+LED +I E +Y +++G L+Q + EV ++ GRD++ L + ++L W + VLS I++++ A E+ K +++S + ++KK++ Sbjct: 13 EQFLLLAKSAKGA--ALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVI-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTI 220
BLAST of CF834062 vs. ExPASy Swiss-Prot
Match: CSN7A_NEUCR (COP9 signalosome complex subunit 7a OS=Neurospora crassa GN=csn-7a PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20 Identity = 69/236 (29.24%), Postives = 121/236 (51.27%), Query Frame = 3 Query: 30 IEQFVKQASTLNGPGPALVKLIVEATSHPSLFAFSEILSVPNLLQLQGT-ESSVYIDLLRLFAHGTWTDYKSNAAHLPQLVPDQAVKLKQLSVLTLAE---MNKVLSYDQLLKE-----------------LEVANVRELEDFLINECMYVGIVKGKLNQLRRCFEV-QFAAGRDLRHGQLENMMQSLTNWLDTSDNVLSVIQDKI----KWAETMCEEDKKHKMEVKSHLQDVKK 659 +E F+ + + P A L+ TS P+ F F+E+L P + L+ + E S Y+ LL++F+HGT+ DY +NA+ LP L DQ +KL+QLS+LTL N L YD + +E LE+++ RELE+ +I+ +Y G+++G+L+ ++ AA RD+ + ++ SL W L ++ + A+ E+++ ++ L+D +K Sbjct: 10 LEPFIVLSKSATSPRAA-ADLVTRVTSAPNTFIFTELLQTPQIQSLEYSHEFSSYLTLLQIFSHGTYADYIANASALPALNDDQKLKLRQLSLLTLVANDGSNVPLDYDAMQRENNQAQPPNQSYASLTRRLELSSARELEELVIS-AIYAGLIEGQLDPANEMVQINSVAALRDVPARGVNGLLSSLQGWAGRCQATLQELEATMANLRDEADRRATEEQEWNNKMSQLLEDEQK 243 The following BLAST results are available for this feature:
BLAST of CF834062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834062 ID=CF834062; Name=CF834062; organism=Citrus sinensis; type=EST; length=755bpback to top |