CF834076

Overview
NameCF834076
Unique NameCF834076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:171..913. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.574e-88
Identity = 168/188 (89.36%), Postives = 173/188 (92.02%), Query Frame = -1
Query:  195 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 758
            AGERGLEIEGKFV FTAIGVYLE++AVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPL GAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDEIFPP            LTISFSKDGSIPKDGVAVIE+NLLSEAVLESMIGKNGVSPAAKKSLAER+SALLNVTSDKMK
Sbjct:   35 AGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 6.169e-66
Identity = 129/181 (71.27%), Postives = 147/181 (81.22%), Query Frame = -1
Query:  219 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 758
            AGERGLEI+GKF+ FTAIGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPL G QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE FPP             LTI+FSKDGS+P+ G  V+EN  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:   37 AGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.057e-66
Identity = 131/182 (71.98%), Postives = 147/182 (80.77%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AG RGLEI+G FV FTAIGVYLE+NAVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPL G QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+ FPP             LTI FSKD S+P+   AVIEN LLSEAVLES++GK+GVSPAAK+SLA R+S LLN
Sbjct:   35 AGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.795e-65
Identity = 131/181 (72.38%), Postives = 146/181 (80.66%), Query Frame = -1
Query:  219 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 758
            AG RG+EI+G FV FTAIGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPL G QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPP             LTI FSKDG IP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:   33 AGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.163e-64
Identity = 129/182 (70.88%), Postives = 145/182 (79.67%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AGERGLEI+GKF+ FTAIGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPL G QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE FPP             LTI FSKD S+P+ G  VIEN LL+ +VLES+IGKNGVSPAAK+SLA R+S L N
Sbjct:   35 AGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.519e-64
Identity = 129/181 (71.27%), Postives = 145/181 (80.11%), Query Frame = -1
Query:  219 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 758
            AG RG+EI+G FV FTAIGVYLE+ AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPL G QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPP             L I  SKDGSIP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:   33 AGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.984e-64
Identity = 127/185 (68.65%), Postives = 148/185 (80.00%), Query Frame = -1
Query:  207 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 758
            AG RG+EI+GKF+ FTAIGVYLE+NAVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPL G QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+ FPP             LT+SFSKDGSIP+ G AV+EN LLSEAVLES+IGK+GVSP AK++LA R+  LLN  S
Sbjct:   36 AGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.421e-64
Identity = 129/180 (71.67%), Postives = 143/180 (79.44%), Query Frame = -1
Query:  222 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 758
            AG RGLEI+GKFV FTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPL G QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPP             LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:   35 AGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.421e-64
Identity = 129/180 (71.67%), Postives = 143/180 (79.44%), Query Frame = -1
Query:  222 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 758
            AG RGLEI+GKFV FTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPL G QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPP             LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:   35 AGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.742e-63
Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = -1
Query:  222 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP-XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 758
            AGERGL I+ KFV FTAIG+YL++ AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPL G QYSEKV+ENC+AIWK  GIYTD E KAI+KF +VFKD+ FPP             L ISFSKDGSIP+   AVI+N LLSEAVLESMIG +GVSPAAK+SLA R+S L
Sbjct:   35 AGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI2.574e-8889.36Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_CAMSI6.169e-6671.27Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_PYRCO8.057e-6671.98Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI1_FRAAN1.795e-6572.38Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_GOSHI1.163e-6470.88Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_FRAAN1.519e-6471.27Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI_ELAUM1.984e-6468.65Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_VITVI4.421e-6471.67Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI4.421e-6471.67Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI2_LOTJA3.742e-6369.44Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834076 ID=CF834076; Name=CF834076; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTTTTTTTTTGGTCGGGACATCAACATTCGTAAATTAACCCTT
AATTTGGGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAG
GAAAGGACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACA
ACTCTGCCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCAT
CTTATCACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCT
TCTTTGCTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACT
GCCTCAGAAAGCAAATTATTCTCTATTACCGCAACACCATCTTTCGGTAT
TGAACCGTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGACTAA
AGAGAATTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTG
AATTTTTCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTT
CCATATGGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAA
TTAATGGCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTG
ACGACGTCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTT
CCCCTTCCATTTGCCGGCGAGTAACGGCACGGCGTTCTCCTCCAAGTACA
CTCCTATCGCCGTGAAATTCACGAACTTCCCTTCAATCTCCAATCCTCTC
TCCCCTGC
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