CF834077

Overview
NameCF834077
Unique NameCF834077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 6.375e-106
Identity = 191/200 (95.50%), Postives = 198/200 (99.00%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            MNPSPSVTELQVENVTFTPS+QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLE++AVPLL+GKWKGKTAEELTESVEFF+DVVTGPFEKFMKVTMILPLTGAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDEIFPPGSSILFTQS GSLTISFSKDGSIPKDGVAVIE+NLLSEAVLESMIGKNGVSP
Sbjct:    1 MNPSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSP 200          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.868e-81
Identity = 154/201 (76.62%), Postives = 174/201 (86.57%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+ S SVTELQVEN TF P+++PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLE++AV  L  KWKGK+A ELTESVEFF+DVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIEN LL+ +VLES+IGKNGVSP
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81
Identity = 151/201 (75.12%), Postives = 172/201 (85.57%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+P PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP L+ KWKGKT EEL +SV+FF+DVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP
Sbjct:    1 MSPVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 150/201 (74.63%), Postives = 171/201 (85.07%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+  PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP L+ KWKGKT EEL +SV+FF+DVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP
Sbjct:    1 MSQVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 7.847e-80
Identity = 146/204 (71.57%), Postives = 176/204 (86.27%), Query Frame = 1
Query:   61 LSPMNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +SP + SPSV ++Q+E+  F P+++PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLE++A+P L+ KWKGKTAEELT+SV+FF+D+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE FPPG SILFTQS  GSLTI+FSKDGS+P+ G  V+EN  LSEAVLES+IGK+GVSP
Sbjct:    1 MSP-SQSPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSP 203          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.025e-79
Identity = 149/201 (74.13%), Postives = 171/201 (85.07%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M P PS+  LQVE   F PS++PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLE+NAVPLL+ KWKGKTAEEL+ESVEFF+D+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKD S+P+   AVIEN LLSEAVLES++GK+GVSP
Sbjct:    1 MAPPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.982e-79
Identity = 148/196 (75.51%), Postives = 170/196 (86.73%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            SVT +Q+  ++F PS++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP L+ KWKGKTAEELTESVEFF+++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKDG IP+ G AVIEN LLSE+VLES+IGK GVSP
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSP 199          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.480e-78
Identity = 145/196 (73.98%), Postives = 172/196 (87.76%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            SVTE+QVE+V F P ++PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLE+NAVP L+ KWKGK+A+ELTESVEFF+D+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+ FPP +S LFTQS  GSLT+SFSKDGSIP+ G AV+EN LLSEAVLES+IGK+GVSP
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSP 202          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.933e-78
Identity = 147/196 (75.00%), Postives = 169/196 (86.22%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            SVT +Q+   +F P+++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP LS KWKGKTAEELTESVEFF+++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS +GSL I  SKDGSIP+ G AVIEN LLSE+VLES+IGK GVSP
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSP 199          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_ARALP (Chalcone--flavonone isomerase OS=Arabidopsis lyrata subsp. petraea GN=CHI PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.253e-77
Identity = 146/205 (71.22%), Postives = 173/205 (84.39%), Query Frame = 1
Query:   64 SPMNPS--PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            SP++PS  PSVT+LQV++VTF PS++ P S+   FLGGAG RGL+I+GKFV FT IGVYLE NAVP LS KWKGKT EEL+ESV FF+++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD EAKA+EKF  +FK+E FPPGSSILF  S +GSLT++FS+D SIP+ G+AVIEN LL+EAVLES+IGKNGVSP
Sbjct:    4 SPVSPSQFPSVTKLQVDSVTFDPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLSVKWKGKTTEELSESVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSRDDSIPETGIAVIENKLLAEAVLESIIGKNGVSP 208          
The following BLAST results are available for this feature:
BLAST of CF834077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI6.375e-10695.50Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI1.868e-8176.62Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_VITVI7.097e-8175.12Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI6.008e-8074.63Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI_CAMSI7.847e-8071.57Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_PYRCO1.025e-7974.13Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI1_FRAAN2.982e-7975.51Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM1.480e-7873.98Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN1.933e-7875.00Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI_ARALP1.253e-7771.22Chalcone--flavonone isomerase OS=Arabidopsis lyrat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834077 ID=CF834077; Name=CF834077; organism=Citrus sinensis; type=EST; length=670bp
CAAAATCTCTTCCTCTTAAAAATTAAGTCTTAAACACACACGTGAAATTA
ATCAAAAATGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGC
AGGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACA
AAGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGG
GAAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCG
TGCCGTTACTCTCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACG
GAATCCGTTGAGTTCTTCAAAGACGTCGTCACAGGTCCCTTTGAGAAATT
CATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGA
AGGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACA
GATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGA
AATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCAT
TGACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCG
GTAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGG
CAAGAATGGTGTTTCTCCTG
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