CF834081

Overview
NameCF834081
Unique NameCF834081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:73..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 9.128e-120
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 662
            SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK
Sbjct:    4 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 323.168 bits (827), Expect = 9.213e-88
Identity = 160/212 (75.47%), Postives = 185/212 (87.26%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            SPSV ++Q+E+  F P+V+PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLED A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF EVFKDE FPPG SILFTQSP GSLTI+FSKDGS+P+ G  V+E+  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:    6 SPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.203e-87
Identity = 167/213 (78.40%), Postives = 184/213 (86.38%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            S SVTELQVEN TF P+V+PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLED AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF EVFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIE+ LL+ +VLES+IGKNGVSPAAK+SLA RLS L N
Sbjct:    4 SLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.019e-86
Identity = 163/212 (76.89%), Postives = 184/212 (86.79%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            PS+  LQVE   F PSV+PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLED+AVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKD S+P+   AVIE+ LLSEAVLES++GK+GVSPAAK+SLA RLS LLN
Sbjct:    5 PSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.738e-86
Identity = 163/210 (77.62%), Postives = 181/210 (86.19%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE+ AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.269e-86
Identity = 163/210 (77.62%), Postives = 180/210 (85.71%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE  AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.964e-86
Identity = 162/213 (76.06%), Postives = 185/213 (86.85%), Query Frame = 3
Query:    3 VSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            ++ SVT +Q+  ++F PSV+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKDG IP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    1 MAQSVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.277e-85
Identity = 159/214 (74.30%), Postives = 186/214 (86.92%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 650
            SVTE+QVE+V F P V+PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLED+AVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF E+FKD+ FPP +S LFTQSP GSLT+SFSKDGSIP+ G AV+E+ LLSEAVLES+IGK+GVSP AK++LA RL  LLN  S
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.245e-84
Identity = 159/213 (74.65%), Postives = 183/213 (85.92%), Query Frame = 3
Query:    3 VSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            ++ SVT +Q+   +F P+V+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSL I  SKDGSIP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    1 MAQSVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.596e-82
Identity = 157/211 (74.41%), Postives = 177/211 (83.89%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPS-VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            PSVT LQVENV F P+ ++PP S  + FLGGAGERGL I+ KFVKFTAIG+YL+D AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF  VFKD+ FPPGSSILFT  P GSL ISFSKDGSIP+   AVI++ LLSEAVLESMIG +GVSPAAK+SLA RLS L
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI9.128e-120100.00Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_CAMSI9.213e-8875.47Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_GOSHI1.203e-8778.40Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_PYRCO1.019e-8676.89Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI1_VITVI1.738e-8677.62Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI2_VITVI2.269e-8677.62Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_FRAAN2.964e-8676.06Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM3.277e-8574.30Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN1.245e-8474.65Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA2.596e-8274.41Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04O02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834081 ID=CF834081; Name=CF834081; organism=Citrus sinensis; type=EST; length=734bp
ACGTCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTTCACG
CCGTCCGTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCGGCGC
AGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACGGCGA
TAGGAGTGTACTTGGAGGATGACGCCGTGCCGTTACTCGCCGGCAAATGG
AAGGGGAAGACTGCAGAGGAGTTGACGGAATCCGTTGAGTTCTTCAGAGA
CGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATCTTGC
CATTAACTGGCGCACAATACTCAGAGAAGGTTGCCGAAAATTGCATTGCC
ATATGGAAATTTTTTGGAATTTACACTGATGCTGAAGCCAAAGCTATTGA
AAAATTCACTGAGGTCTTCAAGGATGAAATTTTCCCACCAGGATCCTCAA
TTCTCTTTACTCAATCACCAGGATCATTGACTATCAGCTTCTCCAAAGAC
GGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAGTAATCTGCTTTC
TGAGGCAGTACTGGAGTCGATGATCGGCAAGAATGGTGTTTCTCCTGCAG
CAAAGAAGAGTTTGGCTGAAAGACTATCAGCACTGTTGAATGTAACTAGT
GATAAGATGAAATGAAGAAGTTGAAAAGTTTGCCAAATAATAAGCGAAGG
CAGAGTTGTTAAATTGGCAAACTTTTTTTTCTTT
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