CF834093

Overview
NameCF834093
Unique NameCF834093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:687..1161. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 8.918e-66
Identity = 125/158 (79.11%), Postives = 137/158 (86.71%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSSDKKR EAMEHLGAD++LVSSD   MQ+AAD LDYIID VP  H LEPYL +LKLDGKLIL GVIN P+QF TPMVML RK+I GSFIGSMKET+EMLEFC+EKGV SM EVI+MDY+N AFERLEKNDVRY F+V VAG
Sbjct:  195 MGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAG 352
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 9.860e-65
Identity = 122/158 (77.22%), Postives = 137/158 (86.71%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSSDKKR EA+EHLGAD +LVSSD NGM+EA DSLDYI D +P  H LEPYL +LKLDGKLIL+GVIN P+QF +PMVML RK+I GSFIGSMKET+EMLEFC+EKG+TS  EVI+MDYVN A ERLEKNDVRY F+V VAG
Sbjct:  194 MGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAG 351
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 1.288e-64
Identity = 122/158 (77.22%), Postives = 138/158 (87.34%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV +AKAMGHHVTVISSSDKK+ EA++HLGAD +LVSSDA  MQEAADSLDYIID VP  H LEPYL +LKLDGKLIL GVINTP+QF +PMVML RKAI GSFIGSMKET+EML+FC EKG+TS  EV++MDY+N AFERLEKNDVRY F+V VAG
Sbjct:  196 MGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAG 353
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.869e-64
Identity = 121/158 (76.58%), Postives = 136/158 (86.08%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSSDKKR EA+EHLGAD +LVSSD NGM+EA DSLDYI D +P  H LEPYL +LKLDGKLIL+GVIN P+QF +PMVML RK+I GSFIGSMKET+EMLEFC+EKG+TS  EVI+MDYVN A ERLEKNDVRY F+V V G
Sbjct:  195 MGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVG 352
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.869e-64
Identity = 121/158 (76.58%), Postives = 136/158 (86.08%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSSDKKR EA+EHLGAD +LVSSD NGM+EA DSLDYI D +P  H LEPYL +LKLDGKLIL+GVIN P+QF +PMVML RK+I GSFIGSMKET+EMLEFC+EKG+TS  EVI+MDYVN A ERLEKNDVRY F+V V G
Sbjct:  195 MGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVG 352
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.429e-63
Identity = 118/158 (74.68%), Postives = 137/158 (86.71%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV +AKA+GHHVTVISSSDKK+ EA+E LGAD +LVSSD  GMQEAADSLDYIID VP  H LEPYL +LK+DGKLIL GVINTP+QF TPMVML RK+I GSF+GS+KET+EMLEF +EKG+TSM E++ MDY+NKAFERLEKNDVRY F+V V G
Sbjct:  196 MGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKG 353
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.429e-63
Identity = 118/158 (74.68%), Postives = 137/158 (86.71%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSS+KKR EA+EHLGAD +LVSSD + MQEA+DSLDYIID VP  H LEPYL +LK+DGKLIL GVINTP+QF +PMVML RK+I GSFIGSMKET+EML+FC+EKGVTS  E+++MDY+N A ERLEKNDVRY F+V V G
Sbjct:  195 MGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDVIG 352
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 7.066e-63
Identity = 118/158 (74.68%), Postives = 136/158 (86.08%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSSDKKR EA++HLGAD +LVSSDA  MQEAADSLDYIID VP  H LEPYL +LK+DGKLIL GV+NTP+QF +PMVML RK+I GSFIGSMKE  EMLEFC+EK ++S  E+++MDY+N AFERLEKNDVRY F+V VAG
Sbjct:  195 MGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAG 352
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 2.685e-62
Identity = 118/158 (74.68%), Postives = 136/158 (86.08%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSS+KKR EA+EHLGAD +LVSSD + MQEAADSLDYIID VP  H LE YL +LK+DGKLIL GVINTP+QF +PMVML RK+I GSFIGSMKET+EML+FC+EKGVTS  E+++MDY+N A ERLEKNDV Y F+V VAG
Sbjct:  195 MGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAG 352
[Close]
BLAST of CF834093 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 7.812e-62
Identity = 118/158 (74.68%), Postives = 135/158 (85.44%), Query Frame = -2 
Query:    2 IGVLIAKAMGHHVTVISSSDKKRVEAMEHLGADQFLVSSDANGMQEAADSLDYIIDAVPANHRLEPYLWMLKLDGKLILSGVINTPMQFPTPMVMLRRKAIAGSFIGSMKETKEMLEFCREKGVTSMTEVIQMDYVNKAFERLEKNDVRYSFIVAVAG 475
            +GV IAKAMGHHVTVISSSDKKR EA+EHLGAD +LVSSD NGM+EA DSLDY+ D +P  H LEPYL +LKLDGKLIL+GVIN P+QF +PMVML  ++I GSFIGSMKET+EMLEFC+EKG+TS  EVI+MDYVN A ERLEKNDVRY F+V V G
Sbjct:  195 MGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVML--ESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVG 350
The following BLAST results are available for this feature:
BLAST of CF834093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CADH_POPDE8.918e-6679.11Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCBO9.860e-6577.22Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARACO1.288e-6477.22Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_EUCGL2.869e-6476.58Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU2.869e-6476.58Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_MEDSA2.429e-6374.68Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH1_TOBAC2.429e-6374.68Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA7.066e-6374.68Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH2_TOBAC2.685e-6274.68Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_EUCGU7.812e-6274.68Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04O13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834093 ID=CF834093; Name=CF834093; organism=Citrus sinensis; type=EST; length=476bp
TTCCGGCAACGGCCACGATGAAGCTGTACCTAACGTCGTTCTTTTCGAGT
CTCTCGAATGCTTTGTTAACGTAATCCATCTGGATCACTTCAGTCATGGA
GGTGACTCCCTTCTCTCGGCAGAATTCAAGCATTTCCTTTGTCTCCTTCA
TGCTCCCAATGAAGCTCCCCGCGATTGCCTTTCTCCGAAGCATAACCATA
GGGGTGGGAAACTGCATGGGAGTGTTAATGACACCCGACAAGATCAACTT
TCCATCAAGCTTCAACATCCAAAGGTAAGGCTCCAGACGGTGATTTGCGG
GTACGGCATCAATGATATAATCAAGTGAGTCGGCGGCTTCTTGCATACCA
TTTGCGTCAGAACTGACGAGGAACTGATCGGCACCAAGATGCTCCATAGC
TTCCACTCTTTTCTTATCGGAAGAGCTAATCACAGTAACATGGTGTCCCA
TCGCCTTAGCTATCAAAACCCCAATG
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