CF834107

Overview
NameCF834107
Unique NameCF834107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:73..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 4.118e-118
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 656
            SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIY DAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK
Sbjct:    4 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 220          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 2.879e-87
Identity = 159/212 (75.00%), Postives = 184/212 (86.79%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            SPSV ++Q+E+  F P+V+PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLED A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G Y DAEAKAIEKF EVFKDE FPPG SILFTQSP GSLTI+FSKDGS+P+ G  V+E+  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:    6 SPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 3.760e-87
Identity = 166/213 (77.93%), Postives = 183/213 (85.92%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            S SVTELQVEN TF P+V+PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLED AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIY DAEAKAIEKF EVFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIE+ LL+ +VLES+IGKNGVSPAAK+SLA RLS L N
Sbjct:    4 SLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.183e-86
Identity = 162/212 (76.42%), Postives = 183/212 (86.32%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            PS+  LQVE   F PSV+PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLED+AVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIY DAE KAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKD S+P+   AVIE+ LLSEAVLES++GK+GVSPAAK+SLA RLS LLN
Sbjct:    5 PSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 5.429e-86
Identity = 162/210 (77.14%), Postives = 180/210 (85.71%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE+ AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIY DAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 7.090e-86
Identity = 162/210 (77.14%), Postives = 179/210 (85.24%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE  AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIY DAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.209e-85
Identity = 161/210 (76.67%), Postives = 182/210 (86.67%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            SVT +Q+  ++F PSV+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIY DAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKDG IP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.694e-85
Identity = 159/214 (74.30%), Postives = 186/214 (86.92%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 650
            SVTE+QVE+V F P V+PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLED+AVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF E+FKD+ FPP +S LFTQSP GSLT+SFSKDGSIP+ G AV+E+ LLSEAVLES+IGK+GVSP AK++LA RL  LLN  S
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.081e-84
Identity = 158/210 (75.24%), Postives = 180/210 (85.71%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            SVT +Q+   +F P+V+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIY DAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSL I  SKDGSIP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 4.756e-82
Identity = 157/213 (73.71%), Postives = 177/213 (83.10%), Query Frame = 3
Query:    3 ASPSVTELQVENVTFTPS-VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            A PSVT LQVENV F P+ ++PP S  + FLGGAGERGL I+ KFVKFTAIG+YL+D AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIY D E KAI+KF  VFKD+ FPPGSSILFT  P GSL ISFSKDGSIP+   AVI++ LLSEAVLESMIG +GVSPAAK+SLA RLS L
Sbjct:    2 ALPSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI4.118e-11899.54Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_CAMSI2.879e-8775.00Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_GOSHI3.760e-8777.93Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_PYRCO3.183e-8676.42Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI1_VITVI5.429e-8677.14Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI2_VITVI7.090e-8677.14Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_FRAAN1.209e-8576.67Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM2.694e-8574.30Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN5.081e-8475.24Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA4.756e-8273.71Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834107 ID=CF834107; Name=CF834107; organism=Citrus sinensis; type=EST; length=658bp
AGGCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTTCACG
CCGTCCGTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCGGCGC
AGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACGGCGA
TAGGAGTGTACTTGGAGGATGACGCCGTGCCGTTACTCGCCGGCAAATGG
AAGGGGAAGACTGCAGAGGAGTTGACGGAATCCGTTGAGTTCTTCAGAGA
CGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATCTTGC
CATTAACTGGCGCACAATACTCAGAGAAGGTTGCCGAAAATTGCATTGCC
ATATGGAAATTTTTTGGAATTTACGCTGATGCTGAAGCCAAAGCTATTGA
AAAATTCACTGAGGTCTTCAAGGATGAAATTTTCCCACCAGGATCCTCAA
TTCTCTTTACTCAATCACCAGGATCATTGACTATCAGCTTCTCCAAAGAC
GGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAGTAATCTGCTTTC
TGAGGCAGTACTGGAGTCGATGATCGGCAAGAATGGTGTTTCTCCTGCAG
CAAAGAAGAGTTTGGCTGAAAGACTATCAGCACTGTTGAATGTAACTAGT
GATAAGAT
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