CF834140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 387.497 bits (994), Expect = 4.510e-107 Identity = 188/220 (85.45%), Postives = 207/220 (94.09%), Query Frame = 2 Query: 131 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYLSFQSFVDSGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 MPS+EDELFPSTPGKFKI+RSN RQ HRCF STSTMFLWALFL+ALTASYLSFQSFVDSGSRY +ASWGGIQWEK VR+SAQIHRSGG+SVLVTGA GFVG+HVSLAL+KRGDGVVGLDNFNNYYDPSLK+AR++LL++ GIFV+EGD+NDAKLLAKLFD VAFTHVMHLAAQAGVRYA++NP SYVHSNIAGLV LLE CK+ANPQP+IVWASSSSV Sbjct: 1 MPSIEDELFPSTPGKFKIDRSN---RQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSV 217
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.419e-68 Identity = 143/228 (62.72%), Postives = 163/228 (71.49%), Query Frame = 2 Query: 131 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCF--TSTSTMFLWALFLVALTASYLSFQSFVDSGSRYFSA------SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M L+D PSTPGKFK FHR +S + + W+L V L + ++S V S S SWGG WEK VRSSA++ G SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL G+FV+EGDINDA LL KLF+ V FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V LLE CKSANPQP+IVWASSSSV Sbjct: 4 MSHLDD--IPSTPGKFK--------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRSPVSSNPADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSV 220
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.039e-68 Identity = 138/223 (61.88%), Postives = 160/223 (71.75%), Query Frame = 2 Query: 131 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTAS--YLSFQSFVDSGSRYFSA-SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M L+D PSTPGKFK+ + R +S + + W+L L Y S S DS R SWGG WEK VRSSA++ G+SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYD SLK++R+ALL G+F++EGDIND LL KLF+ V FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V LLE CKSANPQP+IVWASSSSV Sbjct: 1 MSHLDD--IPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSV 221
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.568e-67 Identity = 137/228 (60.09%), Postives = 162/228 (71.05%), Query Frame = 2 Query: 131 MPSLEDELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYL--------SFQSFVDSGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M L+D PSTPGK+K ++ H + S + LWA +AL YL S ++ DS S +A +GG WEK VR SA+ GG++VLVTGA+GFVGTHVS+AL++RGDGV+GLDNFN YYDP LK+AR+ LL G+FV+EGDINDA LL KLFD V FTHVMHLAAQAGVRYAMQNP SYV+SNIAG V LLE KSANPQP+IVWASSSSV Sbjct: 1 MSHLDD--LPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLNDSSS-ISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSV 225
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.327e-66 Identity = 137/228 (60.09%), Postives = 169/228 (74.12%), Query Frame = 2 Query: 131 MPSLEDELFPSTPGKFKIERSNTMNR-QFHRCFTSTSTMFLWALFLVAL----TASYLSFQSFVDSGSRYFSAS-WGGIQWEKHVRSSAQIHRS--GGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M L+D PS+PGKFK+E+S+ ++R +F T + + L L++L + ++ S D R + +GG WEK +RSSA+I S G++VLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+YYDPSLK+AR+ALL GIF++EGDIND +LL KLF V+FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V LLE CKS NPQP+IVWASSSSV Sbjct: 1 MSRLDD--IPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSV 226
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.136e-60 Identity = 125/228 (54.82%), Postives = 155/228 (67.98%), Query Frame = 2 Query: 179 KIERSNTMNRQFH--RCFTSTSTMFLWALFLVALT-------------------ASYLSFQSFVDSG---SRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 K+ER N+ R+ H + ++S + A LVAL A +L +SF+ +G S S+S GG WEK VR S+ R G+SVLVTGAAGFVG+H SLAL+KRGDGV+G DNFN+YYDPSLK+AR+ LL +F++EGD+ND LL KLFD V FTH++HLAAQAGVRYAM+NP SY+ SNIAG V LLE K+ANPQP+IVWASSSSV Sbjct: 14 KLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSDSRAAAAHHLHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSV 241
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.470e-22 Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M LVTGAAGF+G HVS L + G VVG+DN N+YYD SLK+AR LL G + D+ D + + LF + F V + VRY+++NPH+Y SN+ G + +LE C+ N +++ASSSSV Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRH-NKIQHLLYASSSSV 129
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.184e-20 Identity = 52/130 (40.00%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M +L+TG AGF+G+H++ L K+G V+G+D+ N+YY SLK+ R + + + + L+K+F V++LAAQAGVRY+++NP +Y+ SNI G + +LE + N Q ++++ASSSSV Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKLENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ-NLIYASSSSV 129
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.758e-18 Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = 2 Query: 404 SVLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGIFV-IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 ++LVTG+AGF+G H+S L + V+G+DN NNYY+P LK+ R +L N+ + I+ D +D L + ++HL AQAGVRY++QNP +Y+ SN G + + E + + + +V+ASSSSV Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIE-KVVYASSSSV 135
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.999e-18 Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLN-NHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M L+TG AGF+G HV+ L G VVG D YYD +LK+ R A+L ++G + + D L + + ++HLAAQAGVRY+++NP +YV +N+ G +LE K+ P+ ++ AS+SS+ Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK-HLMLASTSSI 130 The following BLAST results are available for this feature:
BLAST of CF834140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834140 ID=CF834140; Name=CF834140; organism=Citrus sinensis; type=EST; length=792bpback to top |