CF834174

Overview
NameCF834174
Unique NameCF834174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:271..992. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.442e-45
Identity = 93/141 (65.96%), Postives = 105/141 (74.47%), Query Frame = -2
Query:  299 SRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 721
            SRAITQYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D F LVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:   68 SRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44
Identity = 89/142 (62.68%), Postives = 105/142 (73.94%), Query Frame = -2
Query:  299 SRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 721
            SRAITQYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSF L DLHH P +N L+GT VK LFD+RPHVSAW ADI +RPAW+K +
Sbjct:   67 SRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 6.060e-44
Identity = 93/142 (65.49%), Postives = 105/142 (73.94%), Query Frame = -2
Query:  299 SRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 721
            SRAITQYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D F LVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:   68 SRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42
Identity = 84/146 (57.53%), Postives = 109/146 (74.66%), Query Frame = -2
Query:  287 SRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 721
            SRAITQYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSF LVDLHH+PNI  L+ + VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:   67 SRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.263e-41
Identity = 92/149 (61.74%), Postives = 111/149 (74.50%), Query Frame = -2
Query:  287 SRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 721
            SRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSF LVDLHHLP +  L+GT VKKLF+ R HVSAW   I +RP+W K LAL K
Sbjct:   67 SRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.650e-41
Identity = 84/146 (57.53%), Postives = 106/146 (72.60%), Query Frame = -2
Query:  287 SRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 721
            SRAITQYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSF LVDLHH+PNI  L+ T VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:   67 SRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.155e-41
Identity = 89/147 (60.54%), Postives = 109/147 (74.15%), Query Frame = -2
Query:  287 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 721
            SRAITQY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSF L DLHHLP I+ LLGT  K LFD+RP VS W   I++RPAWAKV+ L K
Sbjct:  116 SRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.224e-36
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = -2
Query:  299 SRAITQYIAQEFPDKGTQLT-CPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 721
            SRAITQYIA  + ++GT L     K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++F L DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KVL
Sbjct:   68 SRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.308e-35
Identity = 80/144 (55.56%), Postives = 100/144 (69.44%), Query Frame = -2
Query:  302 SRAITQYIAQEFPDKGTQLT-CPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 721
            SRAITQYIA  + ++GT L     K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++F L DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KV
Sbjct:   68 SRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 65/154 (42.21%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  263 SRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADITSRPAWAKVLALLKH*TLCPLP 721
            SRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D F L D +H     L    P +     ARPHV AW   I +RPA+ K +A +      PLP
Sbjct:   68 SRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
The following BLAST results are available for this feature:
BLAST of CF834174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF1_ARATH1.442e-4565.96Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF_HYOMU2.720e-4462.68Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GST11_ARATH6.060e-4465.49Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_TOBAC3.325e-4257.53Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_SILCU1.263e-4161.74Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC1.650e-4157.53Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF6_ARATH2.155e-4160.54Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GST16_ARATH1.224e-3657.24Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH2.308e-3555.56Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE2.027e-2342.21Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834174 ID=CF834174; Name=CF834174; organism=Citrus sinensis; type=EST; length=722bp
TTTTTTTTTTTTTTTTACGCAGAATATCTCCCCCTTTGTTTTATTAGGGG
ACATAGATAAAATAAAAACCTCCCGCCATCAACATCAAAGTTGAATATGA
GGCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCCA
TATTCTGCAGAATATTGATGACAAACGCCAAACAAGAGAATACGAACTCG
AAAACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCGA
CTAACGTCTAGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCAA
GGACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCTA
ACATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACAA
ATTAATATTGGGGAGATGATGCAAATCGACCAAGGGGAAGCTGTCGCACG
CCAAGTATTTGGACTGAGACAAACGGGCCTCGTAAACATCTAAAATTTTG
GCAAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTCC
AAACATTGGCTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGGGGGGT
CGAACTGGAGTGCCTCCACCTCCTTCCATACCAATAACGGGGCGATGGGC
TTGCCTGGGCATGTTAACTGGGTGCCTTTGTCTGGAAACTCCTGGGCGAT
GTATTGGGTGATTGCCCTTGAT
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