CF834175

Overview
NameCF834175
Unique NameCF834175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:96..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 6.354e-55
Identity = 109/168 (64.88%), Postives = 133/168 (79.17%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            STAT RV A+LYEK+LQ+EL+PVDM+AG HK+EA L+LNPFGQ+P LE GD  LFESRAITQY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LL
Sbjct:   60 STATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLL 227          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.118e-54
Identity = 105/167 (62.87%), Postives = 127/167 (76.05%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            STAT RV A L EKEL +E VPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+
Sbjct:   11 STATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLM 177          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.553e-53
Identity = 105/167 (62.87%), Postives = 125/167 (74.85%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            S A  RV A+L EK+L +ELVPV+M+AG+HKKE F++LNPFGQVP  E GD KLFESRAITQYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+
Sbjct:   11 SPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLM 177          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 5.947e-53
Identity = 104/167 (62.28%), Postives = 125/167 (74.85%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            STAT RV A L EK+L +ELVPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+
Sbjct:   11 STATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLM 177          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 2.260e-52
Identity = 108/170 (63.53%), Postives = 133/170 (78.24%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLL 506
            STATQRV  +LYEK L++E VP+DM AG HK+ ++L+LNPFGQVP LE G+ KLFESRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+
Sbjct:   11 STATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLM 180          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 3.263e-51
Identity = 101/166 (60.84%), Postives = 122/166 (73.49%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            STAT+RV  +L+EK + +E V V++K GEHKKE F+  NPFG+VP  E GD K+FESRAITQYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LL
Sbjct:   12 STATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLL 177          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 4.712e-50
Identity = 102/167 (61.08%), Postives = 122/167 (73.05%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            STAT+RV  +L+EK L +E V +++K GEHKKE F+  NPFG+VP  E GD KLFESRAITQYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LL
Sbjct:   12 STATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLL 178          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.825e-48
Identity = 101/170 (59.41%), Postives = 122/170 (71.76%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQ-LTCPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            ST+T+RV  +L+EK L +ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT  L    K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LL
Sbjct:   12 STSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLL 181          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 1.419e-46
Identity = 99/170 (58.24%), Postives = 123/170 (72.35%), Query Frame = 3
Query:    9 STATQRVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQ-LTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLL 506
            S AT+RV  +L+EK L +ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT  L    K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LL
Sbjct:   12 SIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLL 181          
BLAST of CF834175 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 150.984 bits (380), Expect = 2.965e-36
Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 3
Query:   24 RVFASLYEKELQYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHH 482
            RV   L EK L +E+VPVD+  G HK+  FL+LNPFGQ+P L  GD+ LFESRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H
Sbjct:   17 RVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANH 169          
The following BLAST results are available for this feature:
BLAST of CF834175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF6_ARATH6.354e-5564.88Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_TOBAC4.118e-5462.87Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_HYOMU4.553e-5362.87Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_TOBAC5.947e-5362.28Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF_SILCU2.260e-5263.53Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF1_ARATH3.263e-5160.84Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH4.712e-5061.08Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GST16_ARATH9.825e-4859.41Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF4_ARATH1.419e-4658.24Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE2.965e-3650.33Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834175 ID=CF834175; Name=CF834175; organism=Citrus sinensis; type=EST; length=507bp
CTTGTTTCTCAACTGCTACGCAGCGAGTTTTCGCATCCCTCTACGAGAAG
GAGCTCCAATACGAGCTTGTTCCCGTAGACATGAAGGCTGGTGAACACAA
AAAGGAGGCCTTCCTTTCTTTGAATCCATTCGGTCAAGTTCCGGTGCTTG
AACACGGCGACCAGAAGCTCTTCGAATCAAGGGCAATCACCCAATACATC
GCCCAGGAGTTTCCAGACAAAGGCACCCAGTTAACATGCCCAGGCAAGCC
CATCGCCCCGTTATTGGTATGGAAGGAGGTGGAGGCACTCCAGTTCGACC
CCCCATCATCGAAGCTCAACTGGGAGCTCGTGTACAAGCCAATGTTTGGA
ATGACCACTGATCCAGCTGCGGTTGAAGAAAATGAAGCTAAGCTTGCCAA
AATTTTAGATGTTTACGAGGCCCGTTTGTCTCAGTCCAAATACTTGGCGT
GCGACAGCTTCACCTTGGTCGATTTGCATCATCTCCCCAATATAAATTTG
TTGTTGG
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