CF834186

Overview
NameCF834186
Unique NameCF834186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6751 contig Csv1_Contig6751:512..1192. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.135e-81
Identity = 145/164 (88.41%), Postives = 156/164 (95.12%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            S GLGAMGFGLPAAIGA+VANPDAI+VDIDGDGSFIMNVQELATI+VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y
Sbjct:  489 SSGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 652          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.135e-81
Identity = 145/164 (88.41%), Postives = 156/164 (95.12%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            S GLGAMGFGLPAAIGA+VANPDAI+VDIDGDGSFIMNVQELATI+VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y
Sbjct:  492 SSGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 655          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 9.606e-81
Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            SGGLGAMGFGLPAAIGA+VANPDAI+VDIDGDGSFIMNVQELATI+VE LP+K+LLLNNQHLGMVMQWEDRFYKANRAHT+LGDP++E EIFPNML FA ACGIP A+VT+KADLR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG F DVITEGDGR +Y
Sbjct:  507 SGGLGAMGFGLPAAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFNDVITEGDGRIKY 670          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.639e-80
Identity = 142/164 (86.59%), Postives = 153/164 (93.29%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            SGGLGAMGFGLPAAIGAAV  PD ++VDIDGDGSFIMNVQELATIKVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DLRAAIQ MLDTPGPYLLDVI PHQEHVLPMIPSGGAFKDVITEGDGR+ Y
Sbjct:  501 SGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.639e-80
Identity = 142/164 (86.59%), Postives = 153/164 (93.29%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            SGGLGAMGFGLPAAIGAAV  PD ++VDIDGDGSFIMNVQELATIKVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DLRAAIQ MLDTPGPYLLDVI PHQEHVLPMIPSGGAFKDVITEGDGR+ Y
Sbjct:  504 SGGLGAMGFGLPAAIGAAVGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 667          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.141e-68
Identity = 117/164 (71.34%), Postives = 143/164 (87.20%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            S GLGAMGFGLPAA GA+VANP   +VDIDGDGSF+MN+QELA I++E LP+K+++LNNQHLGMV+QWEDRFYKANRAHTYLG+P  ESEI+P+ +  A+   IP  +VT+K+++RAAI+ ML+TPGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  481 SAGLGAMGFGLPAAAGASVANPGVTVVDIDGDGSFLMNIQELALIRIENLPVKVMVLNNQHLGMVVQWEDRFYKANRAHTYLGNPECESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 644          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.326e-68
Identity = 118/164 (71.95%), Postives = 141/164 (85.98%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            S GLGAMGFGLPAA GA+VANP   +VDIDGDGSF+MNVQELA I++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHTYLG+P  ESEI+P+ +  A+   IP  +VT+K ++RAAI+ ML+TPGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  475 SAGLGAMGFGLPAAAGASVANPGVTVVDIDGDGSFLMNVQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTYLGNPENESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.218e-67
Identity = 116/155 (74.84%), Postives = 139/155 (89.68%), Query Frame = -1
Query:  217 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 681
            SGGLGAMGFGLPAA+GAA+ANP A++VDIDGDGSFIMN+QELATI+VE LP+K+LL+NNQHLGMV+QWED FY ANRA ++LGDP+    +FP+ML FA +CGIP A+VTR+ DLR AIQTMLDTPGP+LLDV+ PHQ+HVLP+IPSGG FKD+I
Sbjct:  482 SGGLGAMGFGLPAAMGAAIANPGAVVVDIDGDGSFIMNIQELATIRVENLPVKVLLINNQHLGMVLQWEDHFYAANRADSFLGDPANPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTMLDTPGPFLLDVVCPHQDHVLPLIPSGGTFKDII 636          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.031e-66
Identity = 115/164 (70.12%), Postives = 140/164 (85.37%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            S GLGAMGFGLPAA GAAVANP   +VDIDGDGSF+MN+QELA I++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHT+LG+P  ESEI+P+ +  A+   IP  +VT+K+++ AAI+ ML+ PGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  475 SAGLGAMGFGLPAAAGAAVANPGVTVVDIDGDGSFLMNIQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTFLGNPENESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKMLEAPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638          
BLAST of CF834186 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 4.790e-64
Identity = 112/166 (67.47%), Postives = 138/166 (83.13%), Query Frame = -1
Query:  190 SGGLGAMGFGLPAAIGAAVANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRE--SEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 681
            S GLGAMGFGLPAA GAAVANP A +VDIDGDGS +MN+QELA ++VE LP+K+++LNNQHLGMV+QWEDRFY ANRAHTYLG+P+     E++P+ +  A   GIP A+VTRK ++RAA++ M+  PGPYLLDV+ PHQEHVLPMIPS GAFKD+I +GDGR+ Y
Sbjct:  498 SAGLGAMGFGLPAAAGAAVANPGATVVDIDGDGSLLMNIQELAMVRVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPMIPSNGAFKDIIVDGDGRSSY 663          
The following BLAST results are available for this feature:
BLAST of CF834186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ILVB3_BRANA1.135e-8188.41Acetolactate synthase 3, chloroplastic OS=Brassica... [more]
ILVB1_BRANA1.135e-8188.41Acetolactate synthase 1, chloroplastic OS=Brassica... [more]
ILVB_ARATH9.606e-8187.20Acetolactate synthase, chloroplastic OS=Arabidopsi... [more]
ILVB2_TOBAC1.639e-8086.59Acetolactate synthase 2, chloroplastic OS=Nicotian... [more]
ILVB1_TOBAC1.639e-8086.59Acetolactate synthase 1, chloroplastic OS=Nicotian... [more]
ILVB1_ORYSJ7.141e-6871.34Acetolactate synthase 1, chloroplastic OS=Oryza sa... [more]
ILVB1_MAIZE9.326e-6871.95Acetolactate synthase 1, chloroplastic OS=Zea mays... [more]
ILVB2_BRANA1.218e-6774.84Acetolactate synthase 2, chloroplastic OS=Brassica... [more]
ILVB2_MAIZE1.031e-6670.12Acetolactate synthase 2, chloroplastic OS=Zea mays... [more]
ILVB2_ORYSJ4.790e-6467.47Probable acetolactate synthase 2, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834186 ID=CF834186; Name=CF834186; organism=Citrus sinensis; type=EST; length=681bp
TTTTTTTTTCCTTTTAATAATAACATTGTAACTCATAGAGTTTGTTTGTT
ACACAAACACTAGTTCCATTAAAACTGACACCTGAACTAAAAACACTGCC
ACACACTCATAGGTAAGTTAAGCCTGCAACTCAAAAGGAACATAAATACA
TAGCCAAGAAGGCATCTATGCTGCTTCAGCTTGTCGGTAATACTGTGTTC
TTCCATCACCTTCAGTTATCACATCTTTAAAAGCTCCACCACTGGGGATC
ATAGGCAGGACATGCTCTTGATGAGGAAAGATGACGTCCAAAAGGTATGG
TCCAGGAGTGTCCAACATAGTCTGAATTGCGGCTCTCAGATCTGCCTTCC
TTGTTACTTGTGCTCCAGGTATTCCACAGGCTTCTGCAAACTTCAACATA
TTCGGAAATATTTCAGACTCTCTTGATGGATCTCCCAAATACGTGTGAGC
CCTATTTGCCTTGTAAAACCGATCCTCCCATTGCATCACCATGCCCAAGT
GCTGATTATTCAACAGCAATATCTTGATGGGGAGTTTCTCTACCTTAATA
GTCGCCAACTCCTGGACGTTCATGATGAAACTCCCATCACCATCAATATC
TACAATGATGGCATCAGGATTTGCAACAGCAGCTCCGATTGCAGCAGGCA
ATCCAAAACCCATAGCCCCTAGTCCTCCGGA
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