CF834187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.159e-72 Identity = 129/146 (88.36%), Postives = 139/146 (95.21%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANPDAI+VDIDGDGSFIMNVQELATI+VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y Sbjct: 507 VANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 652
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.159e-72 Identity = 129/146 (88.36%), Postives = 139/146 (95.21%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANPDAI+VDIDGDGSFIMNVQELATI+VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y Sbjct: 510 VANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 655
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 4.869e-71 Identity = 126/146 (86.30%), Postives = 136/146 (93.15%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANPDAI+VDIDGDGSFIMNVQELATI+VE LP+K+LLLNNQHLGMVMQWEDRFYKANRAHT+LGDP++E EIFPNML FA ACGIP A+VT+KADLR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG F DVITEGDGR +Y Sbjct: 525 VANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFNDVITEGDGRIKY 670
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 1.850e-70 Identity = 124/146 (84.93%), Postives = 135/146 (92.47%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 V PD ++VDIDGDGSFIMNVQELATIKVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DLRAAIQ MLDTPGPYLLDVI PHQEHVLPMIPSGGAFKDVITEGDGR+ Y Sbjct: 519 VGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 1.850e-70 Identity = 124/146 (84.93%), Postives = 135/146 (92.47%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 V PD ++VDIDGDGSFIMNVQELATIKVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DLRAAIQ MLDTPGPYLLDVI PHQEHVLPMIPSGGAFKDVITEGDGR+ Y Sbjct: 522 VGRPDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 667
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.919e-59 Identity = 102/146 (69.86%), Postives = 127/146 (86.99%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANP +VDIDGDGSF+MN+QELA I++E LP+K+++LNNQHLGMV+QWEDRFYKANRAHTYLG+P ESEI+P+ + A+ IP +VT+K+++RAAI+ ML+TPGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y Sbjct: 499 VANPGVTVVDIDGDGSFLMNIQELALIRIENLPVKVMVLNNQHLGMVVQWEDRFYKANRAHTYLGNPECESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 644
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 2.506e-59 Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANP +VDIDGDGSF+MNVQELA I++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHTYLG+P ESEI+P+ + A+ IP +VT+K ++RAAI+ ML+TPGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y Sbjct: 493 VANPGVTVVDIDGDGSFLMNVQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTYLGNPENESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 6.173e-58 Identity = 99/146 (67.81%), Postives = 124/146 (84.93%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANP +VDIDGDGSF+MN+QELA I++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHT+LG+P ESEI+P+ + A+ IP +VT+K+++ AAI+ ML+ PGPYLLD+I PHQEHVLPMIPSGGAFKD+I +GDGRT Y Sbjct: 493 VANPGVTVVDIDGDGSFLMNIQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTFLGNPENESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKMLEAPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 6.173e-58 Identity = 99/137 (72.26%), Postives = 121/137 (88.32%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVI 412 +ANP A++VDIDGDGSFIMN+QELATI+VE LP+K+LL+NNQHLGMV+QWED FY ANRA ++LGDP+ +FP+ML FA +CGIP A+VTR+ DLR AIQTMLDTPGP+LLDV+ PHQ+HVLP+IPSGG FKD+I Sbjct: 500 IANPGAVVVDIDGDGSFIMNIQELATIRVENLPVKVLLINNQHLGMVLQWEDHFYAANRADSFLGDPANPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTMLDTPGPFLLDVVCPHQDHVLPLIPSGGTFKDII 636
BLAST of CF834187 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 2.867e-55 Identity = 96/148 (64.86%), Postives = 122/148 (82.43%), Query Frame = 2 Query: 2 VANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRE--SEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIFPHQEHVLPMIPSGGAFKDVITEGDGRTQY 439 VANP A +VDIDGDGS +MN+QELA ++VE LP+K+++LNNQHLGMV+QWEDRFY ANRAHTYLG+P+ E++P+ + A GIP A+VTRK ++RAA++ M+ PGPYLLDV+ PHQEHVLPMIPS GAFKD+I +GDGR+ Y Sbjct: 516 VANPGATVVDIDGDGSLLMNIQELAMVRVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPMIPSNGAFKDIIVDGDGRSSY 663 The following BLAST results are available for this feature:
BLAST of CF834187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834187 ID=CF834187; Name=CF834187; organism=Citrus sinensis; type=EST; length=461bpback to top |