CF834266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834266 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40 Identity = 83/125 (66.40%), Postives = 96/125 (76.80%), Query Frame = -3 Query: 369 ENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVFCGGALQPLPCPL---------APELDDVSESAVNCTN 716 ENC+LR IQWI +P+AQ +ATVFVAKFFGRAGLMSFISAVPE+Q P+LFQSLLYEA GRTVNPV+GAVGLLWTGNWNVCQ+AVE V GG+L+P+P L +P D+ SE N Sbjct: 15 ENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASEICTEMLN 139
BLAST of CF834266 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.593e-39 Identity = 79/134 (58.96%), Postives = 96/134 (71.64%), Query Frame = -3 Query: 354 ENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVFCGGALQPL-------------PCPLAPELDDVSESAVNCTNNSPKD 716 ENC+LR IQWI T AQ +ATVFVAKFFGRAGLMSFISAVP++QRP+LFQSLLYEA GRTVNPV+GA+G+LWTGNWN+CQ+AVE V GG+L+P+ P P + E ++ +N N D Sbjct: 15 ENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASEICTEMLNLQQNDSTD 148
BLAST of CF834266 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34 Identity = 68/96 (70.83%), Postives = 83/96 (86.46%), Query Frame = -3 Query: 429 ENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVFCGGALQPL 716 E C+LR +QWI + ++Q +ATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLL+EA GRTVNPV+GAVG+LWT NW+VCQ+AVE V GG L+P+ Sbjct: 15 ETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPI 110
BLAST of CF834266 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.360e-30 Identity = 57/101 (56.44%), Postives = 79/101 (78.22%), Query Frame = -3 Query: 414 ENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVFCGGALQPLPCPLA 716 ENC +R +QWI + ++QANATVF+AKF+GRAGLM+ ++ P+ RP++F+SLLYEA GR VNP+ G+VGLLW+GNW++CQ+AVE V G + P+ C A Sbjct: 17 ENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAA 117
BLAST of CF834266 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.973e-27 Identity = 55/90 (61.11%), Postives = 71/90 (78.89%), Query Frame = -3 Query: 447 ENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVFCG 716 E+C +R + WI +P+AQANATVF+AKF+GRAGLM+ I+A P RP +F+SLL+EA GR VNP+ G+VGLLW+GNW +CQ AVE V G Sbjct: 17 EDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKG 106
BLAST of CF834266 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.294e-26 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = -3 Query: 414 ENCMLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVFCGGALQPLPCPLA 716 ++C +R +QWI + +QANAT+F+AKF+GRAGL++ I + P+ RP++F+SLLYEA GR VNPV G+VGL+W+GNW CQ+AV+ V G + P P A Sbjct: 17 QDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSA 117 The following BLAST results are available for this feature:
BLAST of CF834266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834266 ID=CF834266; Name=CF834266; organism=Citrus sinensis; type=EST; length=718bpback to top |