CF834271

Overview
NameCF834271
Unique NameCF834271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:335..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834271 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 62/197 (31.47%), Postives = 93/197 (47.21%), Query Frame = 3
Query:   39 LSWAPS*SEPILDVYGNQVDSSHRYYLVSPLWGVKTGGGISAD-KGKNGQ--CPTDVIQLSPKDKRGKNLVLLP-NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGV-SNVDGVQRLVVVD 596
            LS A S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P N    +VR ST++ + FS      +    ++W++D  + S G+ F+TIG  K      T  + FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:   26 LSAADSAPNPVLDIDGEKLRTGTNYYIVPVL--RDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPC-RWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CF834271 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 51/189 (26.98%), Postives = 91/189 (48.15%), Query Frame = 3
Query:   60 SEPILDVYGNQVDSSHRYYLVSPLWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDN-SIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGVSNVDGVQRLVVVDDND 605
            + P+LD  G+++ +  +YY++S + G   GGG++  +     CP  V+Q       G  ++    D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  + FK+EK                 YK   C + V  SC TLC D+G  + D  Q  + + DN+
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPS-VCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
The following BLAST results are available for this feature:
BLAST of CF834271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MIRA_RICDU5.278e-1231.47Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC1.176e-1126.9821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05D20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834271 ID=CF834271; Name=CF834271; organism=Citrus sinensis; type=EST; length=772bp
CAACACTCTCCTCTTTTAACTTGCTTTGACCACAAAACCTCAGTTGGGCG
CCCTCTTAATCTGAACCTATCTTAGATGTCTATGGCAACCAGGTGGACTC
CAGCCACAGGTATTATCTTGTCTCACCCCTCTGGGGAGTTAAAACCGGCG
GTGGAATTAGCGCGGACAAAGGCAAAAATGGACAGTGTCCAACGGATGTT
ATCCAATTAAGTCCTAAGGACAAAAGGGGAAAGAATTTAGTTTTACTTCC
GAATGACAATTCCATAATTGTCCGGGAGTCCACTAATATTAAATTGAAAT
TCTCAAGAGTTTCTTCTCTTCAGCAGTGTAACAAAGATTCGTTGTGGAAA
GTTGACAACGATAACGCTTCATTAGGAAAGCAGTTTATAACAATCGGTGA
AGGTAAAACGTGTCAAAATTTGTTTAAACTTGAGAAAGTTAGTGCATCAA
TATTTGATATGAAAATAGCACTAGACATTCCCTGTCTATACAAAATTGTT
CATTGTTCAACACCTGTTAATGGTTCTTGTGATACACTCTGCAAAGACGT
TGGCGTTTCTAATGTGGATGGCGTCCAACGTCTAGTTGTGGTTGATGATA
ATGATCAGCCAAATCTGCCTTTGCCTGTTGTGTTATTTCCAGCTGATAGT
GGAAGATCTATGTTATTTCCGTCTCTGTAATGAATAAGCCAGCAGGCTGT
ATTATTCTAAATAATGGACCAGGCTAGTACTCTTTAATCTGTATGGTTAA
GCATAAATAAAACAGCCTATGA
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