CF834412

Overview
NameCF834412
Unique NameCF834412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7741 contig Csv1_Contig7741:11..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834412 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13
Identity = 52/172 (30.23%), Postives = 83/172 (48.26%), Query Frame = 3
Query:  141 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAWEDI----HASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELAYPTQAKAPVQAHFGELDNFVGFSDV 626
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+ + +    + +     ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P          K P+     E D FV   +V
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDM-FENRMDKVDAIFKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV 175          
BLAST of CF834412 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12
Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 3
Query:  141 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGLDWPGAWEDI----HASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELAYPTQAKAPVQAHFGELDNFVGFSDV 626
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ + +    +++     ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P          K P+     E D FV   +V
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEM-FEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV 175          
The following BLAST results are available for this feature:
BLAST of CF834412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
USF_AQUPY1.241e-1330.23Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
DLHH_AQUAE1.373e-1229.65Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05H20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834412 ID=CF834412; Name=CF834412; organism=Citrus sinensis; type=EST; length=662bp
TAATGCTAGCACCTTATTCGAGAATCTTGAGCAGATCAACTCCGCTTCTT
AACCCTTCTCTCGCAAGGACTCACTTTCCCGCCGGTTATCGCTTTGCAGT
CAGATCAATGGCAGACTCTGCAGCTTCTCCCTTCAAGAAAATCCAGATTC
AGAGAGATGATACTACTTTTGATGCATATGTGGTTGGCAAAGAAGACGCC
CCTGGGATTGTTGTAGTTCAGGAGTGGTGGGGTGTTGATTTTGAGATCAA
GAACCATGCTGTCAAAATCTCCCAACTAAATCCTGGATTCAAGGCACTTA
TACCAGATTTATATCGGGGAAAGGTTGGTTTGGATACTGCTGAAGCACAG
CACTTGATGAGTGGTCTTGATTGGCCAGGTGCGTGGGAGGATATCCACGC
TTCAGTTAATTGGCTTAAGGCAAATGGTTCCAAGAAGGTTGGCGTGACTG
GATATTGCATGGGAGGTGCTCTCGCTATTGCAAGTTCTGTCTTAGTTCCT
GAGGTTGATGCTGTTGTTTCATTTTATGGGGTTCCCCCACCTGAGCTCGC
CTATCCTACCCAGGCTAAGGCACCTGTTCAAGCTCATTTTGGGGAGCTTG
ACAATTTTGTTGGCTTTTCAGATGTGAAAACTGCCAAAGCATTGGAAGAA
AAGCTGAAAGCA
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