CF834418

Overview
NameCF834418
Unique NameCF834418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834418 vs. ExPASy Swiss-Prot
Match: ANGLT_ROSHC (Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.055e-18
Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 2 
Query:  293 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGT----------DDYIASVSATAPSVTFHQLPPPVSGLPDTLRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVS 676
            D IV Y  PG GHL SMVELGKL+LT+HP FSI I+  TAP   +A             +YI +VSA  P++ FH L P +S LP+ +        L +E   L  P + + L T+  +S+LKA ++D FC+  F V+
Sbjct:    4 DAIVLYPYPGLGHLISMVELGKLLLTHHPSFSITILASTAPTTIAATAKLVASSNDQLTNYIKAVSADNPAINFHHL-PTISSLPEHIEK----LNLPFEYARLQIPNILQVLQTL--KSSLKALILDMFCDALFDVT 134
The following BLAST results are available for this feature:
BLAST of CF834418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANGLT_ROSHC1.055e-1841.30Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hy... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05H23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834418 ID=CF834418; Name=CF834418; organism=Citrus sinensis; type=EST; length=687bp
TTGAAGCCGAGCAGTAGAGACTGAATCGTTTTCCCCAAAATCCTCCTCCA
CTTGTGAAAGTTTCTTTAAGCTCCCTTTACTTCAACCAACAATTCTTTGC
CCATTTAACCCTGTAACCTACAGGCTTCCAGTATTTCGTCGTGGGCTTCG
ATGCATAATTGCATTGCGATTAGCAAACACAAAGGAGCCCTTTATCACAC
TCTCATTCTCTCTCACTATAATTTCTCACCATTTCTACTGTTTTTTTTAA
AAATATTTTAACTTGTAAAATTAAAGATTAAAAAAAATGAAAGATACGAT
TGTCTTTTATACTTCTCCAGGAAGAGGTCACTTAAACTCCATGGTTGAAT
TAGGAAAATTGATACTCACGTACCACCCTTGCTTCTCCATTGACATCATA
ATCCCCACCGCCCCGTTCGTATCAAGCGCCGGTACCGATGATTACATCGC
CTCCGTCTCCGCCACAGCTCCCTCCGTTACCTTCCACCAACTCCCTCCTC
CGGTTTCCGGCCTACCCGACACTTTACGTTCACCAGCTGACTTCCCAGCC
TTAGTGTACGAGCTTGGCGAACTCAACAACCCTAAACTCCACGAAACCCT
AATAACAATTTCCAAACGCTCAAACCTCAAAGCCTTTGTTATCGATTTCT
TTTGCAACCCCGCGTTTCAAGTTTCCTCAAGTACTCT
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